RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
TGFB3-201ENST00000238682 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
TGFB3-201ENST00000238682 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
TGFB3-201ENST00000238682 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
TGFB3-201ENST00000238682 PTPRTO14522 1441 aa14.06□□□□□ -0.16
TGFB3-201ENST00000238682 FGD6Q6ZV73 1430 aa14.06□□□□□ -0.16
TGFB3-201ENST00000238682 C3P01024 1663 aa14.06□□□□□ -0.16
TGFB3-201ENST00000238682 PODXL2Q9NZ53 605 aa14.05□□□□□ -0.16
TGFB3-201ENST00000238682 IQSEC2Q5JU85 1478 aa14.05□□□□□ -0.16
TGFB3-201ENST00000238682 ZNF142P52746 1687 aaPredicted RBP14.04□□□□□ -0.16
TGFB3-201ENST00000238682 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
TGFB3-201ENST00000238682 GTF3C3Q9Y5Q9 886 aa14.04□□□□□ -0.16
TGFB3-201ENST00000238682 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
TGFB3-201ENST00000238682 PTPN23Q9H3S7 1636 aa14.03□□□□□ -0.16
TGFB3-201ENST00000238682 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.16
TGFB3-201ENST00000238682 MYT1LQ9UL68 1186 aa14.02□□□□□ -0.16
TGFB3-201ENST00000238682 SHANK2Q9UPX8 1470 aa14.02□□□□□ -0.17
TGFB3-201ENST00000238682 DHX29Q7Z478 1369 aaKnown RBP14.02□□□□□ -0.17
TGFB3-201ENST00000238682 SETD1BQ9UPS6 1966 aaKnown RBP14.02□□□□□ -0.17
TGFB3-201ENST00000238682 PLA2R1Q13018 1463 aa14.02□□□□□ -0.17
TGFB3-201ENST00000238682 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
TGFB3-201ENST00000238682 FBXO41Q8TF61 875 aa14□□□□□ -0.17
TGFB3-201ENST00000238682 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
TGFB3-201ENST00000238682 RNF17Q9BXT8 1623 aaKnown RBP13.99□□□□□ -0.17
TGFB3-201ENST00000238682 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
TGFB3-201ENST00000238682 DNMT1P26358 1616 aaKnown RBP13.97□□□□□ -0.17
TGFB3-201ENST00000238682 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.17
TGFB3-201ENST00000238682 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.18
TGFB3-201ENST00000238682 PTPRKQ15262 1439 aa13.96□□□□□ -0.18
TGFB3-201ENST00000238682 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
TGFB3-201ENST00000238682 MYO3AQ8NEV4 1616 aa13.95□□□□□ -0.18
TGFB3-201ENST00000238682 MLECQ14165 292 aa13.95□□□□□ -0.18
TGFB3-201ENST00000238682 PZPP20742 1482 aa13.95□□□□□ -0.18
TGFB3-201ENST00000238682 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
TGFB3-201ENST00000238682 CLTCQ00610 1675 aaKnown RBP13.94□□□□□ -0.18
TGFB3-201ENST00000238682 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
TGFB3-201ENST00000238682 DUOX2Q9NRD8 1548 aa13.94□□□□□ -0.18
TGFB3-201ENST00000238682 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
TGFB3-201ENST00000238682 HRCP23327 699 aa13.93□□□□□ -0.18
TGFB3-201ENST00000238682 NLRP1Q9C000 1473 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
TGFB3-201ENST00000238682 TSPY4P0CV99 314 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 TSPY10P0CW01 314 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 FKBP8Q14318 412 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 PKD2Q13563 968 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 ERBINQ96RT1 1412 aa13.92□□□□□ -0.18
TGFB3-201ENST00000238682 ADGRL2O95490 1459 aa13.91□□□□□ -0.18
TGFB3-201ENST00000238682 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
TGFB3-201ENST00000238682 STRCQ7RTU9 1775 aa13.9□□□□□ -0.18
TGFB3-201ENST00000238682 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
TGFB3-201ENST00000238682 DAPK1P53355 1430 aa13.88□□□□□ -0.19
TGFB3-201ENST00000238682 GCC2Q8IWJ2 1684 aa13.87□□□□□ -0.19
TGFB3-201ENST00000238682 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
TGFB3-201ENST00000238682 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
TGFB3-201ENST00000238682 PRDM15P57071 1507 aaPredicted RBP13.86□□□□□ -0.19
TGFB3-201ENST00000238682 SPATA31D1Q6ZQQ2 1576 aa13.86□□□□□ -0.19
TGFB3-201ENST00000238682 TNRQ92752 1358 aa13.85□□□□□ -0.19
TGFB3-201ENST00000238682 ABCC3O15438 1527 aa13.85□□□□□ -0.19
TGFB3-201ENST00000238682 LMTK2Q8IWU2 1503 aa13.85□□□□□ -0.19
TGFB3-201ENST00000238682 DEPDC5O75140 1603 aa13.85□□□□□ -0.19
TGFB3-201ENST00000238682 CERKQ8TCT0 537 aa13.85□□□□□ -0.19
TGFB3-201ENST00000238682 ABCC5O15440 1437 aa13.84□□□□□ -0.19
TGFB3-201ENST00000238682 HFM1A2PYH4 1435 aa13.83□□□□□ -0.19
TGFB3-201ENST00000238682 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.19
TGFB3-201ENST00000238682 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
TGFB3-201ENST00000238682 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
TGFB3-201ENST00000238682 CEBPAP49715 358 aaPredicted RBP13.83□□□□□ -0.2
TGFB3-201ENST00000238682 HSPA2P54652 639 aa13.82□□□□□ -0.2
TGFB3-201ENST00000238682 CPS1P31327 1500 aa13.82□□□□□ -0.2
TGFB3-201ENST00000238682 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
TGFB3-201ENST00000238682 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
TGFB3-201ENST00000238682 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
TGFB3-201ENST00000238682 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
TGFB3-201ENST00000238682 MED14O60244 1454 aa13.81□□□□□ -0.2
TGFB3-201ENST00000238682 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
TGFB3-201ENST00000238682 KIF3BO15066 747 aa13.8□□□□□ -0.2
TGFB3-201ENST00000238682 KANK1Q14678 1352 aa13.79□□□□□ -0.2
TGFB3-201ENST00000238682 GGT6Q6P531 493 aa13.79□□□□□ -0.2
TGFB3-201ENST00000238682 ERVK-7P63135 1459 aa13.79□□□□□ -0.2
TGFB3-201ENST00000238682 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
TGFB3-201ENST00000238682 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
TGFB3-201ENST00000238682 WASHC2CQ9Y4E1 1318 aa13.78□□□□□ -0.2
TGFB3-201ENST00000238682 KIF15Q9NS87 1388 aa13.78□□□□□ -0.2
TGFB3-201ENST00000238682 RPRD2Q5VT52 1461 aaKnown RBP13.76□□□□□ -0.21
TGFB3-201ENST00000238682 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
TGFB3-201ENST00000238682 UGGT1Q9NYU2 1555 aa13.75□□□□□ -0.21
TGFB3-201ENST00000238682 NAIPQ13075 1403 aa13.74□□□□□ -0.21
TGFB3-201ENST00000238682 SYNMO15061 1565 aa13.74□□□□□ -0.21
TGFB3-201ENST00000238682 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
TGFB3-201ENST00000238682 SLIT1O75093 1534 aa13.73□□□□□ -0.21
TGFB3-201ENST00000238682 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
TGFB3-201ENST00000238682 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
TGFB3-201ENST00000238682 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
TGFB3-201ENST00000238682 ANKLE2Q86XL3 938 aa13.7□□□□□ -0.22
TGFB3-201ENST00000238682 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
TGFB3-201ENST00000238682 UNC13BO14795 1591 aa13.7□□□□□ -0.22
TGFB3-201ENST00000238682 CEP152O94986 1710 aa13.7□□□□□ -0.22
TGFB3-201ENST00000238682 NPHP4O75161 1426 aaPredicted RBP13.69□□□□□ -0.22
TGFB3-201ENST00000238682 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms