RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
HMGCL-201ENST00000235958 RAB3GAP2Q9H2M9 1393 aa15.14■□□□□ 0.01
HMGCL-201ENST00000235958 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
HMGCL-201ENST00000235958 WASHC2CQ9Y4E1 1318 aa15.14■□□□□ 0.01
HMGCL-201ENST00000235958 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
HMGCL-201ENST00000235958 NUP155O75694 1391 aa15.12■□□□□ 0.01
HMGCL-201ENST00000235958 EIF2AK4Q9P2K8 1649 aaKnown RBP15.12■□□□□ 0.01
HMGCL-201ENST00000235958 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
HMGCL-201ENST00000235958 KDM4FA0A1W2PPD8 638 aa15.11■□□□□ 0.01
HMGCL-201ENST00000235958 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
HMGCL-201ENST00000235958 KANK1Q14678 1352 aa15.11■□□□□ 0.01
HMGCL-201ENST00000235958 RNF17Q9BXT8 1623 aaKnown RBP15.08■□□□□ 0
HMGCL-201ENST00000235958 MPHOSPH9Q99550 1183 aa15.07■□□□□ 0
HMGCL-201ENST00000235958 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
HMGCL-201ENST00000235958 MROH1Q8NDA8 1641 aa15.06■□□□□ 0
HMGCL-201ENST00000235958 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
HMGCL-201ENST00000235958 DEPDC5O75140 1603 aa15.06■□□□□ 0
HMGCL-201ENST00000235958 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
HMGCL-201ENST00000235958 ZMYM3Q14202 1370 aa15.05■□□□□ -0
HMGCL-201ENST00000235958 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ -0
HMGCL-201ENST00000235958 UNC13BO14795 1591 aa15.04■□□□□ -0
HMGCL-201ENST00000235958 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
HMGCL-201ENST00000235958 PRDM15P57071 1507 aaPredicted RBP15.03■□□□□ -0
HMGCL-201ENST00000235958 PKD2Q13563 968 aa15.03■□□□□ -0
HMGCL-201ENST00000235958 VWDEQ8N2E2 1590 aa15.02■□□□□ -0
HMGCL-201ENST00000235958 ABCC3O15438 1527 aa15.02■□□□□ -0
HMGCL-201ENST00000235958 KDM5DQ9BY66 1539 aa15.02■□□□□ -0
HMGCL-201ENST00000235958 CNTLNQ9NXG0 1405 aa15.02■□□□□ -0
HMGCL-201ENST00000235958 FBXO31Q5XUX0 539 aaPredicted RBP15.02■□□□□ -0
HMGCL-201ENST00000235958 CLTCQ00610 1675 aaKnown RBP15.02□□□□□ -0.01
HMGCL-201ENST00000235958 FER1L4A9Z1Z3 1794 aa15.01□□□□□ -0.01
HMGCL-201ENST00000235958 MADDQ8WXG6 1647 aa15.01□□□□□ -0.01
HMGCL-201ENST00000235958 PZPP20742 1482 aa15.01□□□□□ -0.01
HMGCL-201ENST00000235958 CEP152O94986 1710 aa15□□□□□ -0.01
HMGCL-201ENST00000235958 FOXD1Q16676 465 aa15□□□□□ -0.01
HMGCL-201ENST00000235958 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
HMGCL-201ENST00000235958 IQGAP3Q86VI3 1631 aa14.99□□□□□ -0.01
HMGCL-201ENST00000235958 LMTK2Q8IWU2 1503 aa14.99□□□□□ -0.01
HMGCL-201ENST00000235958 RIMS1Q86UR5 1692 aaKnown RBP14.98□□□□□ -0.01
HMGCL-201ENST00000235958 PTPRMP28827 1452 aa14.97□□□□□ -0.01
HMGCL-201ENST00000235958 ARHGAP31Q2M1Z3 1444 aa14.97□□□□□ -0.01
HMGCL-201ENST00000235958 NPATQ14207 1427 aa14.96□□□□□ -0.01
HMGCL-201ENST00000235958 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
HMGCL-201ENST00000235958 TET3O43151 1660 aa14.96□□□□□ -0.01
HMGCL-201ENST00000235958 ZC3H13Q5T200 1668 aaKnown RBP14.96□□□□□ -0.01
HMGCL-201ENST00000235958 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
HMGCL-201ENST00000235958 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
HMGCL-201ENST00000235958 C3P01024 1663 aa14.94□□□□□ -0.02
HMGCL-201ENST00000235958 EFCAB6Q5THR3 1501 aa14.93□□□□□ -0.02
HMGCL-201ENST00000235958 E9PCH4 1651 aa14.93□□□□□ -0.02
HMGCL-201ENST00000235958 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
HMGCL-201ENST00000235958 DHX57Q6P158 1386 aaKnown RBP14.91□□□□□ -0.02
HMGCL-201ENST00000235958 IDI1Q13907 227 aa14.91□□□□□ -0.02
HMGCL-201ENST00000235958 SLC52A1Q9NWF4 448 aa14.9□□□□□ -0.02
HMGCL-201ENST00000235958 NOS1P29475 1434 aa14.9□□□□□ -0.02
HMGCL-201ENST00000235958 TNRQ92752 1358 aa14.89□□□□□ -0.03
HMGCL-201ENST00000235958 PTPRTO14522 1441 aa14.89□□□□□ -0.03
HMGCL-201ENST00000235958 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
HMGCL-201ENST00000235958 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
HMGCL-201ENST00000235958 ANKRD30BQ9BXX2 1392 aa14.88□□□□□ -0.03
HMGCL-201ENST00000235958 PREX1Q8TCU6 1659 aa14.87□□□□□ -0.03
HMGCL-201ENST00000235958 CCER1Q8TC90 406 aaPredicted RBP14.86□□□□□ -0.03
HMGCL-201ENST00000235958 SPATA31D1Q6ZQQ2 1576 aa14.85□□□□□ -0.03
HMGCL-201ENST00000235958 CHGAP10645 457 aaKnown RBP14.84□□□□□ -0.03
HMGCL-201ENST00000235958 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
HMGCL-201ENST00000235958 SYNMO15061 1565 aa14.83□□□□□ -0.04
HMGCL-201ENST00000235958 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
HMGCL-201ENST00000235958 SPHKAPQ2M3C7 1700 aa14.83□□□□□ -0.04
HMGCL-201ENST00000235958 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
HMGCL-201ENST00000235958 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-201ENST00000235958 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
HMGCL-201ENST00000235958 RGL3Q3MIN7 710 aa14.8□□□□□ -0.04
HMGCL-201ENST00000235958 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
HMGCL-201ENST00000235958 NLRP1Q9C000 1473 aa14.8□□□□□ -0.04
HMGCL-201ENST00000235958 TRPM2O94759 1503 aa14.79□□□□□ -0.04
HMGCL-201ENST00000235958 UHRF1BP1Q6BDS2 1440 aa14.78□□□□□ -0.04
HMGCL-201ENST00000235958 CLSPNQ9HAW4 1339 aa14.78□□□□□ -0.04
HMGCL-201ENST00000235958 CLTCL1P53675 1640 aa14.77□□□□□ -0.04
HMGCL-201ENST00000235958 A2ML1A8K2U0 1454 aa14.77□□□□□ -0.04
HMGCL-201ENST00000235958 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.05
HMGCL-201ENST00000235958 PIK3C2BO00750 1634 aa14.77□□□□□ -0.05
HMGCL-201ENST00000235958 HSPA2P54652 639 aa14.76□□□□□ -0.05
HMGCL-201ENST00000235958 KIF1BO60333 1816 aa14.75□□□□□ -0.05
HMGCL-201ENST00000235958 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
HMGCL-201ENST00000235958 TMEM131LA2VDJ0 1609 aa14.74□□□□□ -0.05
HMGCL-201ENST00000235958 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
HMGCL-201ENST00000235958 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
HMGCL-201ENST00000235958 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
HMGCL-201ENST00000235958 TXNDC2Q86VQ3 553 aa14.73□□□□□ -0.05
HMGCL-201ENST00000235958 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
HMGCL-201ENST00000235958 LMTK3Q96Q04 1460 aa14.72□□□□□ -0.05
HMGCL-201ENST00000235958 LTKP29376 864 aa14.72□□□□□ -0.05
HMGCL-201ENST00000235958 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
HMGCL-201ENST00000235958 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
HMGCL-201ENST00000235958 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
HMGCL-201ENST00000235958 RPGRIP1LQ68CZ1 1315 aa14.71□□□□□ -0.05
HMGCL-201ENST00000235958 DCAF11Q8TEB1 546 aa14.71□□□□□ -0.05
HMGCL-201ENST00000235958 L3MBTL2Q969R5 705 aa14.71□□□□□ -0.05
HMGCL-201ENST00000235958 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
HMGCL-201ENST00000235958 EID1Q9Y6B2 187 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms