RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 KIF3BO15066 747 aa15.74■□□□□ 0.11
CDCA3-201ENST00000229265 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
CDCA3-201ENST00000229265 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
CDCA3-201ENST00000229265 FGD6Q6ZV73 1430 aa15.74■□□□□ 0.11
CDCA3-201ENST00000229265 CEP152O94986 1710 aa15.74■□□□□ 0.11
CDCA3-201ENST00000229265 MIA2Q96PC5 1412 aa15.73■□□□□ 0.11
CDCA3-201ENST00000229265 ZNF142P52746 1687 aaPredicted RBP15.73■□□□□ 0.11
CDCA3-201ENST00000229265 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
CDCA3-201ENST00000229265 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
CDCA3-201ENST00000229265 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
CDCA3-201ENST00000229265 DAPK1P53355 1430 aa15.7■□□□□ 0.1
CDCA3-201ENST00000229265 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
CDCA3-201ENST00000229265 ABCC3O15438 1527 aa15.7■□□□□ 0.1
CDCA3-201ENST00000229265 CEP170BQ9Y4F5 1589 aaPredicted RBP15.7■□□□□ 0.1
CDCA3-201ENST00000229265 NCKAP5LQ9HCH0 1330 aa15.69■□□□□ 0.1
CDCA3-201ENST00000229265 NPATQ14207 1427 aa15.69■□□□□ 0.1
CDCA3-201ENST00000229265 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
CDCA3-201ENST00000229265 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
CDCA3-201ENST00000229265 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
CDCA3-201ENST00000229265 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
CDCA3-201ENST00000229265 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
CDCA3-201ENST00000229265 RRP7BPQ9NSQ0 103 aa15.66■□□□□ 0.1
CDCA3-201ENST00000229265 TIMELESSQ9UNS1 1208 aa15.66■□□□□ 0.1
CDCA3-201ENST00000229265 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
CDCA3-201ENST00000229265 PZPP20742 1482 aa15.65■□□□□ 0.1
CDCA3-201ENST00000229265 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
CDCA3-201ENST00000229265 EIF2AK4Q9P2K8 1649 aaKnown RBP15.65■□□□□ 0.1
CDCA3-201ENST00000229265 SHANK2Q9UPX8 1470 aa15.64■□□□□ 0.09
CDCA3-201ENST00000229265 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
CDCA3-201ENST00000229265 KIF15Q9NS87 1388 aa15.63■□□□□ 0.09
CDCA3-201ENST00000229265 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
CDCA3-201ENST00000229265 DUOX2Q9NRD8 1548 aa15.63■□□□□ 0.09
CDCA3-201ENST00000229265 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
CDCA3-201ENST00000229265 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
CDCA3-201ENST00000229265 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
CDCA3-201ENST00000229265 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
CDCA3-201ENST00000229265 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
CDCA3-201ENST00000229265 TNRQ92752 1358 aa15.61■□□□□ 0.09
CDCA3-201ENST00000229265 A2ML1A8K2U0 1454 aa15.6■□□□□ 0.09
CDCA3-201ENST00000229265 CERKQ8TCT0 537 aa15.6■□□□□ 0.09
CDCA3-201ENST00000229265 SPATA31D1Q6ZQQ2 1576 aa15.6■□□□□ 0.09
CDCA3-201ENST00000229265 VWDEQ8N2E2 1590 aa15.6■□□□□ 0.09
CDCA3-201ENST00000229265 PTPRTO14522 1441 aa15.6■□□□□ 0.09
CDCA3-201ENST00000229265 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
CDCA3-201ENST00000229265 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
CDCA3-201ENST00000229265 RAB3GAP2Q9H2M9 1393 aa15.59■□□□□ 0.09
CDCA3-201ENST00000229265 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
CDCA3-201ENST00000229265 ZNF335Q9H4Z2 1342 aaPredicted RBP15.58■□□□□ 0.08
CDCA3-201ENST00000229265 ADGRL2O95490 1459 aa15.58■□□□□ 0.08
CDCA3-201ENST00000229265 ZC3H13Q5T200 1668 aaKnown RBP15.57■□□□□ 0.08
CDCA3-201ENST00000229265 STRCP1A6NGW2 1772 aa15.57■□□□□ 0.08
CDCA3-201ENST00000229265 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
CDCA3-201ENST00000229265 SYNMO15061 1565 aa15.56■□□□□ 0.08
CDCA3-201ENST00000229265 POLR1AO95602 1720 aaPredicted RBP15.56■□□□□ 0.08
CDCA3-201ENST00000229265 UBR1Q8IWV7 1749 aa15.55■□□□□ 0.08
CDCA3-201ENST00000229265 PLA2R1Q13018 1463 aa15.55■□□□□ 0.08
CDCA3-201ENST00000229265 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
CDCA3-201ENST00000229265 ITGAEP38570 1179 aa15.55■□□□□ 0.08
CDCA3-201ENST00000229265 FAM135AQ9P2D6 1515 aa15.54■□□□□ 0.08
CDCA3-201ENST00000229265 ERBINQ96RT1 1412 aa15.54■□□□□ 0.08
CDCA3-201ENST00000229265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.087e-9■■■□□ 17.5
CDCA3-201ENST00000229265 PIK3C2BO00750 1634 aa15.52■□□□□ 0.08
CDCA3-201ENST00000229265 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
CDCA3-201ENST00000229265 ALKQ9UM73 1620 aa15.5■□□□□ 0.07
CDCA3-201ENST00000229265 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
CDCA3-201ENST00000229265 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
CDCA3-201ENST00000229265 MYO5BQ9ULV0 1848 aa15.49■□□□□ 0.07
CDCA3-201ENST00000229265 LMTK2Q8IWU2 1503 aa15.48■□□□□ 0.07
CDCA3-201ENST00000229265 ANKRD30AQ9BXX3 1397 aa15.48■□□□□ 0.07
CDCA3-201ENST00000229265 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
CDCA3-201ENST00000229265 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
CDCA3-201ENST00000229265 LTKP29376 864 aa15.47■□□□□ 0.07
CDCA3-201ENST00000229265 ARHGAP31Q2M1Z3 1444 aa15.47■□□□□ 0.07
CDCA3-201ENST00000229265 UNC13BO14795 1591 aa15.46■□□□□ 0.07
CDCA3-201ENST00000229265 E9PCH4 1651 aa15.45■□□□□ 0.06
CDCA3-201ENST00000229265 NAIPQ13075 1403 aa15.45■□□□□ 0.06
CDCA3-201ENST00000229265 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
CDCA3-201ENST00000229265 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
CDCA3-201ENST00000229265 NOS1P29475 1434 aa15.44■□□□□ 0.06
CDCA3-201ENST00000229265 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
CDCA3-201ENST00000229265 MED14O60244 1454 aa15.43■□□□□ 0.06
CDCA3-201ENST00000229265 PKD2Q13563 968 aa15.42■□□□□ 0.06
CDCA3-201ENST00000229265 IDI1Q13907 227 aa15.42■□□□□ 0.06
CDCA3-201ENST00000229265 SENP3Q9H4L4 574 aaPredicted RBP15.42■□□□□ 0.06
CDCA3-201ENST00000229265 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
CDCA3-201ENST00000229265 NPHP4O75161 1426 aaPredicted RBP15.42■□□□□ 0.06
CDCA3-201ENST00000229265 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
CDCA3-201ENST00000229265 TET3O43151 1660 aa15.41■□□□□ 0.06
CDCA3-201ENST00000229265 SLIT1O75093 1534 aa15.4■□□□□ 0.06
CDCA3-201ENST00000229265 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
CDCA3-201ENST00000229265 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
CDCA3-201ENST00000229265 TMEM131LA2VDJ0 1609 aa15.36■□□□□ 0.05
CDCA3-201ENST00000229265 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
CDCA3-201ENST00000229265 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
CDCA3-201ENST00000229265 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
CDCA3-201ENST00000229265 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
CDCA3-201ENST00000229265 THEMISQ8N1K5 641 aaPredicted RBP15.35■□□□□ 0.05
CDCA3-201ENST00000229265 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
CDCA3-201ENST00000229265 TMEM2Q9UHN6 1383 aa15.34■□□□□ 0.05
CDCA3-201ENST00000229265 ZFYVE9O95405 1425 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms