RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 CCER1Q8TC90 406 aaPredicted RBP34■■■■□ 3.03
USF2-201ENST00000222305 KIF3BO15066 747 aa33.99■■■■□ 3.03
USF2-201ENST00000222305 RNF17Q9BXT8 1623 aaKnown RBP33.99■■■■□ 3.03
USF2-201ENST00000222305 KDM5DQ9BY66 1539 aa33.99■■■■□ 3.03
USF2-201ENST00000222305 MROH1Q8NDA8 1641 aa33.98■■■■□ 3.03
USF2-201ENST00000222305 ACIN1Q9UKV3 1341 aaKnown RBP33.98■■■■□ 3.03
USF2-201ENST00000222305 NUP155O75694 1391 aa33.96■■■■□ 3.03
USF2-201ENST00000222305 PZPP20742 1482 aa33.96■■■■□ 3.03
USF2-201ENST00000222305 IQGAP3Q86VI3 1631 aa33.95■■■■□ 3.03
USF2-201ENST00000222305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.95■■■■□ 3.031e-6■■□□□ 12.1
USF2-201ENST00000222305 PRDM15P57071 1507 aaPredicted RBP33.93■■■■□ 3.02
USF2-201ENST00000222305 FAM135AQ9P2D6 1515 aa33.91■■■■□ 3.02
USF2-201ENST00000222305 AGLP35573 1532 aa33.9■■■■□ 3.02
USF2-201ENST00000222305 MPHOSPH9Q99550 1183 aa33.89■■■■□ 3.02
USF2-201ENST00000222305 CEP152O94986 1710 aa33.87■■■■□ 3.01
USF2-201ENST00000222305 SLC4A1APQ9BWU0 796 aaKnown RBP33.86■■■■□ 3.01
USF2-201ENST00000222305 VWDEQ8N2E2 1590 aa33.86■■■■□ 3.01
USF2-201ENST00000222305 GGT6Q6P531 493 aa33.84■■■■□ 3.01
USF2-201ENST00000222305 KANK1Q14678 1352 aa33.81■■■■□ 3
USF2-201ENST00000222305 TET3O43151 1660 aa33.79■■■■□ 3
USF2-201ENST00000222305 FOXD1Q16676 465 aa33.77■■■■□ 3
USF2-201ENST00000222305 ARID4BQ4LE39 1312 aaPredicted RBP33.76■■■■□ 3
USF2-201ENST00000222305 PKD2Q13563 968 aa33.75■■■□□ 2.99
USF2-201ENST00000222305 E9PCH4 1651 aa33.74■■■□□ 2.99
USF2-201ENST00000222305 ZC3H13Q5T200 1668 aaKnown RBP33.74■■■□□ 2.99
USF2-201ENST00000222305 ABCC3O15438 1527 aa33.72■■■□□ 2.99
USF2-201ENST00000222305 MLECQ14165 292 aa33.71■■■□□ 2.99
USF2-201ENST00000222305 LMTK2Q8IWU2 1503 aa33.71■■■□□ 2.99
USF2-201ENST00000222305 CAMSAP1Q5T5Y3 1602 aa33.7■■■□□ 2.99
USF2-201ENST00000222305 CLSPNQ9HAW4 1339 aa33.7■■■□□ 2.98
USF2-201ENST00000222305 CLTCQ00610 1675 aaKnown RBP33.68■■■□□ 2.98
USF2-201ENST00000222305 EFCAB6Q5THR3 1501 aa33.68■■■□□ 2.98
USF2-201ENST00000222305 WASHC2CQ9Y4E1 1318 aa33.67■■■□□ 2.98
USF2-201ENST00000222305 CFAP65Q6ZU64 1925 aaKnown RBP33.65■■■□□ 2.98
USF2-201ENST00000222305 ANKRD30BQ9BXX2 1392 aa33.61■■■□□ 2.97
USF2-201ENST00000222305 SPHKAPQ2M3C7 1700 aa33.6■■■□□ 2.97
USF2-201ENST00000222305 SIN3AQ96ST3 1273 aa33.59■■■□□ 2.97
USF2-201ENST00000222305 FER1L4A9Z1Z3 1794 aa33.57■■■□□ 2.96
USF2-201ENST00000222305 PPP6R1Q9UPN7 881 aa33.56■■■□□ 2.96
USF2-201ENST00000222305 NPATQ14207 1427 aa33.54■■■□□ 2.96
USF2-201ENST00000222305 NEUROD1Q13562 356 aa33.52■■■□□ 2.96
USF2-201ENST00000222305 PLA2R1Q13018 1463 aa33.51■■■□□ 2.96
USF2-201ENST00000222305 RPRD2Q5VT52 1461 aaKnown RBP33.51■■■□□ 2.96
USF2-201ENST00000222305 ARHGAP31Q2M1Z3 1444 aa33.49■■■□□ 2.95
USF2-201ENST00000222305 MROH2AA6NES4 1674 aa33.48■■■□□ 2.95
USF2-201ENST00000222305 ESF1Q9H501 851 aaKnown RBP33.48■■■□□ 2.95
USF2-201ENST00000222305 PREX1Q8TCU6 1659 aa33.48■■■□□ 2.95
USF2-201ENST00000222305 TRPM2O94759 1503 aa33.47■■■□□ 2.95
USF2-201ENST00000222305 PTPRTO14522 1441 aa33.45■■■□□ 2.95
USF2-201ENST00000222305 MADDQ8WXG6 1647 aa33.45■■■□□ 2.94
USF2-201ENST00000222305 ADAMTSL3P82987 1691 aa33.43■■■□□ 2.94
USF2-201ENST00000222305 CLTCL1P53675 1640 aa33.42■■■□□ 2.94
USF2-201ENST00000222305 ZEB1P37275 1124 aaPredicted RBP33.42■■■□□ 2.94
USF2-201ENST00000222305 CNTLNQ9NXG0 1405 aa33.42■■■□□ 2.94
USF2-201ENST00000222305 CCDC144AA2RUR9 1427 aa33.41■■■□□ 2.94
USF2-201ENST00000222305 RIMS1Q86UR5 1692 aaKnown RBP33.4■■■□□ 2.94
USF2-201ENST00000222305 UGGT1Q9NYU2 1555 aa33.39■■■□□ 2.94
USF2-201ENST00000222305 C3P01024 1663 aa33.39■■■□□ 2.94
USF2-201ENST00000222305 SYNMO15061 1565 aa33.38■■■□□ 2.93
USF2-201ENST00000222305 ZMYM3Q14202 1370 aa33.38■■■□□ 2.93
USF2-201ENST00000222305 NOS1P29475 1434 aa33.37■■■□□ 2.93
USF2-201ENST00000222305 ERVK-7P63135 1459 aa33.34■■■□□ 2.93
USF2-201ENST00000222305 FBXO31Q5XUX0 539 aaPredicted RBP33.33■■■□□ 2.93
USF2-201ENST00000222305 KIF1BO60333 1816 aa33.33■■■□□ 2.93
USF2-201ENST00000222305 SPATA31D1Q6ZQQ2 1576 aa33.31■■■□□ 2.92
USF2-201ENST00000222305 PIK3C2BO00750 1634 aa33.31■■■□□ 2.92
USF2-201ENST00000222305 TONSLQ96HA7 1378 aa33.31■■■□□ 2.92
USF2-201ENST00000222305 PLPPR3Q6T4P5 718 aa33.31■■■□□ 2.92
USF2-201ENST00000222305 CEBPAP49715 358 aaPredicted RBP33.27■■■□□ 2.92
USF2-201ENST00000222305 TIMELESSQ9UNS1 1208 aa33.2■■■□□ 2.91
USF2-201ENST00000222305 MYO5BQ9ULV0 1848 aa33.2■■■□□ 2.91
USF2-201ENST00000222305 KDM4FA0A1W2PPD8 638 aa33.19■■■□□ 2.9
USF2-201ENST00000222305 SPATA31E1Q6ZUB1 1445 aa33.18■■■□□ 2.9
USF2-201ENST00000222305 L3MBTL2Q969R5 705 aa33.18■■■□□ 2.9
USF2-201ENST00000222305 ADGRB3O60242 1522 aa33.16■■■□□ 2.9
USF2-201ENST00000222305 RGL3Q3MIN7 710 aa33.15■■■□□ 2.9
USF2-201ENST00000222305 PTPRMP28827 1452 aa33.14■■■□□ 2.9
USF2-201ENST00000222305 IDI1Q13907 227 aa33.14■■■□□ 2.9
USF2-201ENST00000222305 TNRQ92752 1358 aa33.14■■■□□ 2.9
USF2-201ENST00000222305 NEURL4Q96JN8 1562 aa33.14■■■□□ 2.9
USF2-201ENST00000222305 SLC52A1Q9NWF4 448 aa33.13■■■□□ 2.89
USF2-201ENST00000222305 TMEM131LA2VDJ0 1609 aa33.11■■■□□ 2.89
USF2-201ENST00000222305 CHGAP10645 457 aaKnown RBP33.11■■■□□ 2.89
USF2-201ENST00000222305 IFT172Q9UG01 1749 aa33.09■■■□□ 2.89
USF2-201ENST00000222305 PPP1R15AO75807 674 aaPredicted RBP33.07■■■□□ 2.88
USF2-201ENST00000222305 MYO3AQ8NEV4 1616 aa33.06■■■□□ 2.88
USF2-201ENST00000222305 DCAF11Q8TEB1 546 aa33.04■■■□□ 2.88
USF2-201ENST00000222305 PPLO60437 1756 aa33.04■■■□□ 2.88
USF2-201ENST00000222305 UBR1Q8IWV7 1749 aa33.03■■■□□ 2.88
USF2-201ENST00000222305 NLRP1Q9C000 1473 aa33.01■■■□□ 2.87
USF2-201ENST00000222305 KDM2AQ9Y2K7 1162 aa33.01■■■□□ 2.87
USF2-201ENST00000222305 ZNF326Q5BKZ1 582 aaKnown RBP33■■■□□ 2.87
USF2-201ENST00000222305 KDM5AP29375 1690 aaKnown RBP33■■■□□ 2.87
USF2-201ENST00000222305 SETD1BQ9UPS6 1966 aaKnown RBP32.98■■■□□ 2.87
USF2-201ENST00000222305 STAG3Q9UJ98 1225 aa32.98■■■□□ 2.87
USF2-201ENST00000222305 A2ML1A8K2U0 1454 aa32.97■■■□□ 2.87
USF2-201ENST00000222305 NEXMIFQ5QGS0 1516 aa32.96■■■□□ 2.87
USF2-201ENST00000222305 NBPF8Q3BBV2 869 aa32.93■■■□□ 2.86
USF2-201ENST00000222305 CEP170BQ9Y4F5 1589 aaPredicted RBP32.91■■■□□ 2.86
USF2-201ENST00000222305 ZNF142P52746 1687 aaPredicted RBP32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms