RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 HSPA2P54652 639 aa35.76■■■■□ 3.32
HOMER3-201ENST00000221222 CEBPAP49715 358 aaPredicted RBP35.7■■■■□ 3.31
HOMER3-201ENST00000221222 RNF17Q9BXT8 1623 aaKnown RBP35.69■■■■□ 3.3
HOMER3-201ENST00000221222 ANKRD50Q9ULJ7 1429 aa35.69■■■■□ 3.3
HOMER3-201ENST00000221222 GCC2Q8IWJ2 1684 aa35.69■■■■□ 3.3
HOMER3-201ENST00000221222 KIF3BO15066 747 aa35.68■■■■□ 3.3
HOMER3-201ENST00000221222 HFM1A2PYH4 1435 aa35.65■■■■□ 3.3
HOMER3-201ENST00000221222 NAIPQ13075 1403 aa35.64■■■■□ 3.3
HOMER3-201ENST00000221222 DEPDC5O75140 1603 aa35.63■■■■□ 3.29
HOMER3-201ENST00000221222 MROH1Q8NDA8 1641 aa35.61■■■■□ 3.29
HOMER3-201ENST00000221222 GGT6Q6P531 493 aa35.6■■■■□ 3.29
HOMER3-201ENST00000221222 PPP6R1Q9UPN7 881 aa35.59■■■■□ 3.29
HOMER3-201ENST00000221222 FAM135AQ9P2D6 1515 aa35.58■■■■□ 3.29
HOMER3-201ENST00000221222 PRDM15P57071 1507 aaPredicted RBP35.57■■■■□ 3.28
HOMER3-201ENST00000221222 PREX1Q8TCU6 1659 aa35.56■■■■□ 3.28
HOMER3-201ENST00000221222 ESF1Q9H501 851 aaKnown RBP35.52■■■■□ 3.28
HOMER3-201ENST00000221222 UNC13BO14795 1591 aa35.52■■■■□ 3.28
HOMER3-201ENST00000221222 CNTLNQ9NXG0 1405 aa35.51■■■■□ 3.28
HOMER3-201ENST00000221222 KDM5DQ9BY66 1539 aa35.51■■■■□ 3.27
HOMER3-201ENST00000221222 MROH2AA6NES4 1674 aa35.5■■■■□ 3.27
HOMER3-201ENST00000221222 C3P01024 1663 aa35.5■■■■□ 3.27
HOMER3-201ENST00000221222 CLTCQ00610 1675 aaKnown RBP35.5■■■■□ 3.27
HOMER3-201ENST00000221222 ZC3H13Q5T200 1668 aaKnown RBP35.5■■■■□ 3.27
HOMER3-201ENST00000221222 TRIM26Q12899 539 aaPredicted RBP35.5■■■■□ 3.27
HOMER3-201ENST00000221222 VWDEQ8N2E2 1590 aa35.48■■■■□ 3.27
HOMER3-201ENST00000221222 ABCC3O15438 1527 aa35.44■■■■□ 3.26
HOMER3-201ENST00000221222 FBXO41Q8TF61 875 aa35.43■■■■□ 3.26
HOMER3-201ENST00000221222 CEP152O94986 1710 aa35.43■■■■□ 3.26
HOMER3-201ENST00000221222 UHRF1BP1Q6BDS2 1440 aa35.43■■■■□ 3.26
HOMER3-201ENST00000221222 SETD1BQ9UPS6 1966 aaKnown RBP35.43■■■■□ 3.26
HOMER3-201ENST00000221222 KANK1Q14678 1352 aa35.43■■■■□ 3.26
HOMER3-201ENST00000221222 WASHC2CQ9Y4E1 1318 aa35.42■■■■□ 3.26
HOMER3-201ENST00000221222 SETD5Q9C0A6 1442 aa35.42■■■■□ 3.26
HOMER3-201ENST00000221222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.4■■■■□ 3.26
HOMER3-201ENST00000221222 LMTK2Q8IWU2 1503 aa35.38■■■■□ 3.25
HOMER3-201ENST00000221222 IQGAP3Q86VI3 1631 aa35.37■■■■□ 3.25
HOMER3-201ENST00000221222 CAMSAP1Q5T5Y3 1602 aa35.36■■■■□ 3.25
HOMER3-201ENST00000221222 ZMYM3Q14202 1370 aa35.36■■■■□ 3.25
HOMER3-201ENST00000221222 NUP155O75694 1391 aa35.31■■■■□ 3.24
HOMER3-201ENST00000221222 STRCQ7RTU9 1775 aa35.31■■■■□ 3.24
HOMER3-201ENST00000221222 RAB3GAP2Q9H2M9 1393 aa35.3■■■■□ 3.24
HOMER3-201ENST00000221222 TET3O43151 1660 aa35.29■■■■□ 3.24
HOMER3-201ENST00000221222 ACIN1Q9UKV3 1341 aaKnown RBP35.28■■■■□ 3.24
HOMER3-201ENST00000221222 ARHGAP31Q2M1Z3 1444 aa35.27■■■■□ 3.24
HOMER3-201ENST00000221222 PZPP20742 1482 aa35.27■■■■□ 3.24
HOMER3-201ENST00000221222 EFCAB6Q5THR3 1501 aa35.27■■■■□ 3.24
HOMER3-201ENST00000221222 HRCP23327 699 aa35.23■■■■□ 3.23
HOMER3-201ENST00000221222 NPATQ14207 1427 aa35.2■■■■□ 3.23
HOMER3-201ENST00000221222 TRIM52Q96A61 297 aa35.2■■■■□ 3.23
HOMER3-201ENST00000221222 CERKQ8TCT0 537 aa35.19■■■■□ 3.22
HOMER3-201ENST00000221222 RPRD2Q5VT52 1461 aaKnown RBP35.17■■■■□ 3.22
HOMER3-201ENST00000221222 E9PCH4 1651 aa35.16■■■■□ 3.22
HOMER3-201ENST00000221222 DMRT2Q9Y5R5 561 aa35.16■■■■□ 3.22
HOMER3-201ENST00000221222 SPATA31D1Q6ZQQ2 1576 aa35.15■■■■□ 3.22
HOMER3-201ENST00000221222 CFAP65Q6ZU64 1925 aaKnown RBP35.13■■■■□ 3.21
HOMER3-201ENST00000221222 ERVK-7P63135 1459 aa35.12■■■■□ 3.21
HOMER3-201ENST00000221222 FBXO31Q5XUX0 539 aaPredicted RBP35.12■■■■□ 3.21
HOMER3-201ENST00000221222 MYO3AQ8NEV4 1616 aa35.06■■■■□ 3.2
HOMER3-201ENST00000221222 SLC4A1APQ9BWU0 796 aaKnown RBP35.06■■■■□ 3.2
HOMER3-201ENST00000221222 PTPRTO14522 1441 aa35.05■■■■□ 3.2
HOMER3-201ENST00000221222 NOS1P29475 1434 aa35.05■■■■□ 3.2
HOMER3-201ENST00000221222 TNRQ92752 1358 aa35.05■■■■□ 3.2
HOMER3-201ENST00000221222 MPHOSPH9Q99550 1183 aa35.03■■■■□ 3.2
HOMER3-201ENST00000221222 PCGF6Q9BYE7 350 aa35.01■■■■□ 3.2
HOMER3-201ENST00000221222 SYNMO15061 1565 aa35■■■■□ 3.19
HOMER3-201ENST00000221222 ZNF142P52746 1687 aaPredicted RBP35■■■■□ 3.19
HOMER3-201ENST00000221222 PKD2Q13563 968 aa35■■■■□ 3.19
HOMER3-201ENST00000221222 SPHKAPQ2M3C7 1700 aa34.99■■■■□ 3.19
HOMER3-201ENST00000221222 CEP170BQ9Y4F5 1589 aaPredicted RBP34.98■■■■□ 3.19
HOMER3-201ENST00000221222 NCKAP5LQ9HCH0 1330 aa34.97■■■■□ 3.19
HOMER3-201ENST00000221222 NLRP1Q9C000 1473 aa34.96■■■■□ 3.19
HOMER3-201ENST00000221222 PIK3C2BO00750 1634 aa34.91■■■■□ 3.18
HOMER3-201ENST00000221222 A2ML1A8K2U0 1454 aa34.9■■■■□ 3.18
HOMER3-201ENST00000221222 TRPM2O94759 1503 aa34.89■■■■□ 3.18
HOMER3-201ENST00000221222 PLA2R1Q13018 1463 aa34.87■■■■□ 3.17
HOMER3-201ENST00000221222 SLC52A1Q9NWF4 448 aa34.87■■■■□ 3.17
HOMER3-201ENST00000221222 LTBP4Q8N2S1 1624 aa34.86■■■■□ 3.17
HOMER3-201ENST00000221222 FOXD1Q16676 465 aa34.85■■■■□ 3.17
HOMER3-201ENST00000221222 KDM5AP29375 1690 aaKnown RBP34.83■■■■□ 3.17
HOMER3-201ENST00000221222 UGGT1Q9NYU2 1555 aa34.83■■■■□ 3.17
HOMER3-201ENST00000221222 IDI1Q13907 227 aa34.82■■■■□ 3.16
HOMER3-201ENST00000221222 UBR1Q8IWV7 1749 aa34.8■■■■□ 3.16
HOMER3-201ENST00000221222 CLTCL1P53675 1640 aa34.79■■■■□ 3.16
HOMER3-201ENST00000221222 ZNF335Q9H4Z2 1342 aaPredicted RBP34.77■■■■□ 3.16
HOMER3-201ENST00000221222 ADGRB3O60242 1522 aa34.76■■■■□ 3.16
HOMER3-201ENST00000221222 TMEM131LA2VDJ0 1609 aa34.73■■■■□ 3.15
HOMER3-201ENST00000221222 DHX57Q6P158 1386 aaKnown RBP34.72■■■■□ 3.15
HOMER3-201ENST00000221222 ANKRD30BQ9BXX2 1392 aa34.72■■■■□ 3.15
HOMER3-201ENST00000221222 THEMISQ8N1K5 641 aaPredicted RBP34.7■■■■□ 3.15
HOMER3-201ENST00000221222 KIF1BO60333 1816 aa34.7■■■■□ 3.15
HOMER3-201ENST00000221222 MYO5BQ9ULV0 1848 aa34.69■■■■□ 3.14
HOMER3-201ENST00000221222 CCDC144AA2RUR9 1427 aa34.69■■■■□ 3.14
HOMER3-201ENST00000221222 POLR1AO95602 1720 aaPredicted RBP34.67■■■■□ 3.14
HOMER3-201ENST00000221222 STAG3Q9UJ98 1225 aa34.66■■■■□ 3.14
HOMER3-201ENST00000221222 IQSEC2Q5JU85 1478 aa34.63■■■■□ 3.13
HOMER3-201ENST00000221222 SLIT1O75093 1534 aa34.63■■■■□ 3.13
HOMER3-201ENST00000221222 NEURL4Q96JN8 1562 aa34.63■■■■□ 3.13
HOMER3-201ENST00000221222 ARHGAP23Q9P227 1491 aa34.62■■■■□ 3.13
HOMER3-201ENST00000221222 CHGAP10645 457 aaKnown RBP34.59■■■■□ 3.13
HOMER3-201ENST00000221222 TMEM2Q9UHN6 1383 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms