RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W TRR2P38816 342 aa2.61□□□□□ -1.99
SMD2YLR275W APE4P38821 490 aa2.61□□□□□ -1.99
SMD2YLR275W CPR7P47103 393 aa2.61□□□□□ -1.99
SMD2YLR275W EFM3P47163 339 aa2.61□□□□□ -1.99
SMD2YLR275W API2Q04413 109 aa2.61□□□□□ -1.99
SMD2YLR275W SLM3Q12093 417 aa2.61□□□□□ -1.99
SMD2YLR275W FRE6Q12473 712 aa2.61□□□□□ -1.99
SMD2YLR275W RAD23P32628 398 aaKnown RBP2.6□□□□□ -1.99
SMD2YLR275W AGA2P32781 87 aa2.6□□□□□ -1.99
SMD2YLR275W FRM2P37261 193 aa2.6□□□□□ -1.99
SMD2YLR275W YPT35P38815 214 aaKnown RBP2.6□□□□□ -1.99
SMD2YLR275W GGC1P38988 300 aa2.6□□□□□ -1.99
SMD2YLR275W LCP5P40079 357 aaPredicted RBP2.6□□□□□ -1.99
SMD2YLR275W MOB2P43563 287 aa2.6□□□□□ -1.99
SMD2YLR275W TRM82Q03774 444 aa2.6□□□□□ -1.99
SMD2YLR275W YOL075CQ08234 1294 aa2.6□□□□□ -1.99
SMD2YLR275W FRE8Q12209 686 aa2.6□□□□□ -1.99
SMD2YLR275W SKS1Q12505 502 aa2.6□□□□□ -1.99
SMD2YLR275W FAR1P21268 830 aa2.59□□□□□ -1.99
SMD2YLR275W DAD2P36162 133 aa2.59□□□□□ -1.99
SMD2YLR275W YSW1P38280 609 aa2.59□□□□□ -1.99
SMD2YLR275W SNL1P40548 159 aa2.59□□□□□ -1.99
SMD2YLR275W AIM33Q04516 312 aa2.59□□□□□ -1.99
SMD2YLR275W YOL029CQ08187 201 aa2.59□□□□□ -1.99
SMD2YLR275W APC2Q12440 853 aa2.59□□□□□ -1.99
SMD2YLR275W TFB5Q3E7C1 72 aaPredicted RBP2.59□□□□□ -1.99
SMD2YLR275W BGL2P15703 313 aaKnown RBP2.58□□□□□ -2
SMD2YLR275W CKA2P19454 339 aa2.58□□□□□ -2
SMD2YLR275W VPH1P32563 840 aaKnown RBP2.58□□□□□ -2
SMD2YLR275W AST1P35183 429 aa2.58□□□□□ -2
SMD2YLR275W RCK2P38623 610 aa2.58□□□□□ -2
SMD2YLR275W UFE1P41834 346 aa2.58□□□□□ -2
SMD2YLR275W MPS2P53159 387 aa2.58□□□□□ -2
SMD2YLR275W LST7P53237 242 aa2.58□□□□□ -2
SMD2YLR275W ZRG17P53735 605 aa2.58□□□□□ -2
SMD2YLR275W SUR7P54003 302 aa2.58□□□□□ -2
SMD2YLR275W INP2Q03824 705 aa2.58□□□□□ -2
SMD2YLR275W MMT2Q08970 484 aa2.58□□□□□ -2
SMD2YLR275W FSH3Q99369 266 aa2.58□□□□□ -2
SMD2YLR275W FLO11P08640 1367 aa2.58□□□□□ -2
SMD2YLR275W RPS16AP0CX51 143 aaKnown RBP2.57□□□□□ -2
SMD2YLR275W RPS16BP0CX52 143 aaKnown RBP2.57□□□□□ -2
SMD2YLR275W SCH9P11792 824 aaKnown RBP2.57□□□□□ -2
SMD2YLR275W DAP2P18962 818 aa2.57□□□□□ -2
SMD2YLR275W PHO84P25297 587 aaKnown RBP2.57□□□□□ -2
SMD2YLR275W SKG6P32900 734 aaPredicted RBP2.57□□□□□ -2
SMD2YLR275W TIP20P33891 701 aa2.57□□□□□ -2
SMD2YLR275W ALE1Q08548 619 aa2.57□□□□□ -2
SMD2YLR275W NFI1Q12216 726 aa2.57□□□□□ -2
SMD2YLR275W SPT7P35177 1332 aa2.57□□□□□ -2
SMD2YLR275W URA10P30402 227 aa2.56□□□□□ -2
SMD2YLR275W FAA1P30624 700 aaKnown RBP2.56□□□□□ -2
SMD2YLR275W LAS1P36146 502 aaPredicted RBP2.56□□□□□ -2
SMD2YLR275W RBG1P39729 369 aa2.56□□□□□ -2
SMD2YLR275W DIA1P54005 336 aa2.56□□□□□ -2
SMD2YLR275W SCS7Q03529 384 aa2.56□□□□□ -2
SMD2YLR275W UBA1P22515 1024 aaKnown RBP2.55□□□□□ -2
SMD2YLR275W GRR1P24814 1151 aa2.55□□□□□ -2
SMD2YLR275W ADH5P38113 351 aaKnown RBP2.55□□□□□ -2
SMD2YLR275W EFM1P38732 585 aa2.55□□□□□ -2
SMD2YLR275W ATG7P38862 630 aa2.55□□□□□ -2
SMD2YLR275W YNL320WP42840 284 aa2.55□□□□□ -2
SMD2YLR275W SMP3Q04174 516 aa2.55□□□□□ -2
SMD2YLR275W AIM45Q12480 344 aaKnown RBP2.55□□□□□ -2
SMD2YLR275W OPI1P21957 404 aa2.54□□□□□ -2
SMD2YLR275W YKL071WP36086 256 aa2.54□□□□□ -2
SMD2YLR275W SPO73P40031 143 aa2.54□□□□□ -2
SMD2YLR275W RPN14P53196 417 aa2.54□□□□□ -2
SMD2YLR275W YNR068CP53754 272 aa2.54□□□□□ -2
SMD2YLR275W APC4Q04601 652 aa2.54□□□□□ -2
SMD2YLR275W POT1P27796 417 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SMD2YLR275W SRB2P34162 210 aa2.53□□□□□ -2
SMD2YLR275W BDH1P39714 382 aa2.53□□□□□ -2
SMD2YLR275W YIL059CP40520 121 aa2.53□□□□□ -2
SMD2YLR275W COS4P43542 379 aa2.53□□□□□ -2
SMD2YLR275W NAS6P50086 228 aa2.53□□□□□ -2
SMD2YLR275W PRM1P53835 661 aa2.53□□□□□ -2
SMD2YLR275W VTI1Q04338 217 aa2.53□□□□□ -2
SMD2YLR275W DBP9Q06218 594 aaKnown RBP2.53□□□□□ -2
SMD2YLR275W YDL211CQ12121 372 aa2.53□□□□□ -2
SMD2YLR275W YDR018CQ12185 396 aa2.53□□□□□ -2
SMD2YLR275W ARF2P19146 181 aaKnown RBP2.52□□□□□ -2.01
SMD2YLR275W CKI1P20485 582 aa2.52□□□□□ -2.01
SMD2YLR275W COX10P21592 462 aa2.52□□□□□ -2.01
SMD2YLR275W RDS1P25611 832 aa2.52□□□□□ -2.01
SMD2YLR275W MRPS5P33759 307 aa2.52□□□□□ -2.01
SMD2YLR275W PTK1P36002 662 aaPredicted RBP2.52□□□□□ -2.01
SMD2YLR275W PCH2P38126 564 aa2.52□□□□□ -2.01
SMD2YLR275W IST2P38250 946 aa2.52□□□□□ -2.01
SMD2YLR275W SIF2P38262 535 aa2.52□□□□□ -2.01
SMD2YLR275W TAE1P38340 232 aa2.52□□□□□ -2.01
SMD2YLR275W YFR018CP43599 363 aa2.52□□□□□ -2.01
SMD2YLR275W RPA34P47006 233 aaPredicted RBP2.52□□□□□ -2.01
SMD2YLR275W LSG1P53145 640 aaKnown RBP2.52□□□□□ -2.01
SMD2YLR275W NRM1P53718 249 aa2.52□□□□□ -2.01
SMD2YLR275W AQR1P53943 586 aa2.52□□□□□ -2.01
SMD2YLR275W UTP6Q02354 440 aaKnown RBP2.52□□□□□ -2.01
SMD2YLR275W UTP15Q04305 513 aaKnown RBP2.52□□□□□ -2.01
SMD2YLR275W CSM3Q04659 317 aa2.52□□□□□ -2.01
SMD2YLR275W FAR10Q06001 478 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms