RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ZBTB33Q86T24 672 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 CKAP2LQ8IYA6 745 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 KREMEN2Q8NCW0 462 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 ATOH1Q92858 354 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-222ENST00000641587 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
PHGDH-222ENST00000641587 CASD1Q96PB1 797 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 PRRX2Q99811 253 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-222ENST00000641587 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 ZNF302Q9NR11 478 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 SH2B1Q9NRF2 756 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-222ENST00000641587 TMEM161AQ9NX61 479 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 TPCN1Q9ULQ1 816 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 SMCO2A6NFE2 343 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 C2CD4DB7Z1M9 353 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 GPR182O15218 404 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 ZBTB43O43298 467 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 LARGE1O95461 756 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 BRD1O95696 1058 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 FGFR4P22455 802 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF76P36508 570 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
PHGDH-222ENST00000641587 SLC26A2P50443 739 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 CRYBB1P53674 252 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-222ENST00000641587 FAM189BP81408 668 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 PLCB3Q01970 1234 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 ME3Q16798 604 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF484Q5JVG2 852 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 JAKMIP3Q5VZ66 844 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 FAM160B1Q5W0V3 765 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 KANK3Q6NY19 840 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 KCNT2Q6UVM3 1135 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 SGMS1Q86VZ5 419 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 PLA2G4DQ86XP0 818 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 CCDC83Q8IWF9 413 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 LRRC71Q8N4P6 559 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 RNF169Q8NCN4 708 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 RIPOR3Q96MK2 946 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 AGXT2Q9BYV1 514 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 TMEM117Q9H0C3 514 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 BRPF3Q9ULD4 1205 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 HCFC2Q9Y5Z7 792 aa11.33□□□□□ -0.6
PHGDH-222ENST00000641587 ZFHX2Q9C0A1 2572 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-222ENST00000641587 GOLGA8AA7E2F4 631 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 NT5C1B-RDH14C9J2C7 533 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 IPO5O00410 1097 aaKnown RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 ASGR2P07307 311 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 CA8P35219 290 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 METAP2P50579 478 aaKnown RBP eCLIP11.32□□□□□ -0.61e-10■■■□□ 15.8
PHGDH-222ENST00000641587 NLRP11P59045 1033 aaKnown RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 CCT2P78371 535 aaKnown RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 CLLU1OSQ5K130 101 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 PDE12Q6L8Q7 609 aaKnown RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 MIS18BP1Q6P0N0 1132 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 ASCL5Q7RTU5 278 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 TMC7Q7Z402 723 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 FBXL16Q8N461 479 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 TMEM105Q8N8V8 129 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 NECAB1Q8N987 351 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 AUTS2Q8WXX7 1259 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF274Q96GC6 653 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 ZNF558Q96NG5 402 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 ELAC1Q9H777 363 aaKnown RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
PHGDH-222ENST00000641587 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-222ENST00000641587 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 FOSP01100 380 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 PDIA3P30101 505 aaKnown RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 CDC27P30260 824 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 RTN1Q16799 776 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 ODR4Q5SWX8 454 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 NIPA1Q7RTP0 329 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 TMEM173Q86WV6 379 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 LRRC43Q8N309 656 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 HELQQ8TDG4 1101 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 CRYGNQ8WXF5 182 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 NGRNQ9NPE2 291 aaKnown RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 FAM217BQ9NTX9 383 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 BARHL2Q9NY43 387 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 PUF60Q9UHX1 559 aaKnown RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 AKT3Q9Y243 479 aa11.31□□□□□ -0.6
PHGDH-222ENST00000641587 MAFBQ9Y5Q3 323 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-222ENST00000641587 PTPRZ1P23471 2315 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms