RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 SLC39A2Q9NP94 309 aa9.05□□□□□ -0.96
CACNA1A-232ENST00000636966 PCDHA2Q9Y5H9 948 aa9.05□□□□□ -0.96
CACNA1A-232ENST00000636966 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
CACNA1A-232ENST00000636966 XIRP2A4UGR9 3374 aa9.05□□□□□ -0.96
CACNA1A-232ENST00000636966 MYADML2A6NDP7 307 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 ZNF18P17022 549 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 TCF7P36402 384 aaPredicted RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 TCP11X2Q5H9J9 407 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 NOC3LQ8WTT2 800 aaKnown RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CARD6Q9BX69 1037 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 PCDHA10Q9Y5I2 948 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 IGSF9BQ9UPX0 1349 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 SOWAHDA6NJG2 315 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 BACH1O14867 736 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 NKRFO15226 690 aaKnown RBP eCLIP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 FCGRTP55899 365 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CACNB2Q08289 660 aaPredicted RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 STK4Q13043 487 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 HIC1Q14526 733 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CCDC40Q4G0X9 1142 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 C1orf186Q6ZWK4 172 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 SYT2Q8N9I0 419 aaPredicted RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CCDC51Q96ER9 411 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 TUFT1Q9NNX1 390 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 WBP1LQ9NX94 342 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 ZHX1Q9UKY1 873 aaPredicted RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 P4HBP07237 508 aaKnown RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 SUPT20HL2P0C7V6 817 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 XRCC5P13010 732 aaKnown RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CCND3P30281 292 aaPredicted RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 RGS2P41220 211 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 KCNJ6P48051 423 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 RARRES1P49788 294 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CASP5P51878 434 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 NAP1L1P55209 391 aaKnown RBP9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 KRT76Q01546 638 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 GIT2Q14161 759 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 RINT1Q6NUQ1 792 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CYP26C1Q6V0L0 522 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 KIAA0895Q8NCT3 520 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 ERMNQ8TAM6 284 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 FIZ1Q96SL8 496 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 C7orf25Q9BPX7 421 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 ABHD16BQ9H3Z7 469 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 RNPEPQ9H4A4 650 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 VTA1Q9NP79 307 aa9.04□□□□□ -0.96
CACNA1A-232ENST00000636966 CYBAP13498 195 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 YWHABP31946 246 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 QARSP47897 775 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 NCBP1Q09161 790 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 MAPK7Q13164 816 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 ERCC6LQ2NKX8 1250 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 TOGARAM2Q6ZUX3 1019 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 CACNA2D4Q7Z3S7 1137 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 CNPY4Q8N129 248 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 TC2NQ8N9U0 490 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 SOCS4Q8WXH5 440 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 DHTKD1Q96HY7 919 aaPredicted RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 SPATA33Q96N06 139 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 PANX2Q96RD6 677 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 REEP2Q9BRK0 252 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 C16orf70Q9BSU1 422 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 MMRN2Q9H8L6 949 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 ZNF286BP0CG31 522 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 PMS1P54277 932 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 SPA17Q15506 151 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 DUSP28Q4G0W2 176 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 HAUS3Q68CZ6 603 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 TMCO3Q6UWJ1 677 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 CDHR1Q96JP9 859 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 LOC102724159A0A0B4J2E5 919 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 MFAP3LO75121 409 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 KIF20AO95235 890 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 EEF1GP26641 437 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 MARK3P27448 753 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 DRP2Q13474 957 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 PWP2Q15269 919 aaKnown RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 SMAP1Q8IYB5 467 aaPredicted RBP9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 P2RX5Q93086 422 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 TUBGCP2Q9BSJ2 902 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
CACNA1A-232ENST00000636966 FRMD3A2A2Y4 597 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 LYPLA2O95372 231 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 HOXD13P35453 343 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 DNM2P50570 870 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 PRKCEQ02156 737 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 KCNA1Q09470 495 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 TTLL4Q14679 1199 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 C4orf19Q8IY42 314 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 OR8K1Q8NGG5 319 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 CAGE1Q8TC20 777 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 PDLIM7Q9NR12 457 aa9.02□□□□□ -0.96
CACNA1A-232ENST00000636966 INTS13Q9NVM9 706 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms