RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TBK1Q9UHD2 729 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 GDAQ9Y2T3 454 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ABCC12Q96J65 1359 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ARAP1Q96P48 1450 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 HNRNPRO43390 633 aaKnown RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 GRIK1P39086 918 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CYP27A1Q02318 531 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CHRNDQ07001 517 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 TP53BP2Q13625 1128 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 ARHGEF7Q14155 803 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 SLC27A3Q5K4L6 730 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 CMTR1Q8N1G2 835 aaKnown RBP5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RAPGEF5Q92565 580 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 RMDN1Q96DB5 314 aa5.92□□□□□ -1.46
SCN1A-209ENST00000635750 AP3B1O00203 1094 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PIK3R2O00459 728 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 WBP4O75554 376 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ATP1A1P05023 1023 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ASNSP08243 561 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ANGPT1Q15389 498 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 GRAMD1BQ3KR37 738 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ARHGAP15Q53QZ3 475 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 DEPDC1Q5TB30 811 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 OXCT2Q9BYC2 517 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 KIAA1468Q9P260 1216 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 EPN1Q9Y6I3 576 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 TNKSO95271 1327 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 WDR91A4D1P6 747 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PGRMC1O00264 195 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PRRG1O14668 218 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 TADA2AO75478 443 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 KRT14P02533 472 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 HIST1H2AGP0C0S8 130 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 HIST1H2ADP20671 130 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PPP3CCP48454 512 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 IFNAR2P48551 515 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 CCT5P48643 541 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 MXI1P50539 228 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 RBM6P78332 1123 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 RASSF3Q86WH2 238 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PLEKHA8Q96JA3 519 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 HIST1H2AHQ96KK5 128 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PHACTR3Q96KR7 559 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 HIST1H2AJQ99878 128 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 TUBGCP2Q9BSJ2 902 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 H2AFJQ9BTM1 129 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SERPINB13Q9UIV8 391 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PRG3Q9Y2Y8 225 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 IQCA1LA6NCM1 817 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SPAG7O75391 227 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 FCER1AP12319 257 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ZFXP17010 805 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 POU5F1BQ06416 359 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF568Q3ZCX4 644 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SPATA1Q5VX52 437 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ARMC2Q8NEN0 867 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ASAP3Q8TDY4 903 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SYMPKQ92797 1274 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SPON2Q9BUD6 331 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 UNC45AQ9H3U1 944 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 DBNDD1Q9H9R9 158 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 NDE1Q9NXR1 346 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ATF5Q9Y2D1 282 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ATP8A1Q9Y2Q0 1164 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 DTNAQ9Y4J8 743 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SPACA6W5XKT8 324 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 H0Y626 953 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 COPEO14579 308 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 TRIM16O95361 564 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 CALB1P05937 261 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SNX17Q15036 470 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SPDYAQ5MJ70 313 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 AP1ARQ63HQ0 302 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 BCAS4Q8TDM0 211 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ANKRD49Q8WVL7 239 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SH3BP1Q9Y3L3 701 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 TK2O00142 265 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 CLIC2O15247 247 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ATP5JP18859 108 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 LRRC74AQ0VAA2 488 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 PPP4R3CPQ6ZMV5 832 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 SPATA2LQ8IUW3 424 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 L3MBTL3Q96JM7 780 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 MYO3BQ8WXR4 1341 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 CFAP74Q9C0B2 1584 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 KRT38O76015 456 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 KRT16P08779 473 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 CPA1P15085 419 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 HMOX2P30519 316 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 AKT1P31749 480 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 ABCE1P61221 599 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 FKBP3Q00688 224 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 NME3Q13232 169 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 EFHC2Q5JST6 749 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 C6orf118Q5T5N4 469 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 RBM41Q96IZ5 413 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 AAASQ9NRG9 546 aa5.91□□□□□ -1.46
SCN1A-209ENST00000635750 TSR3Q9UJK0 312 aaKnown RBP5.91□□□□□ -1.46
SCN1A-209ENST00000635750 CAB39Q9Y376 341 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms