RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 CCDC137Q6PK04 289 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 PDZD4Q76G19 769 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 GUF1Q8N442 669 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 PPM1NQ8N819 430 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■■■□□ 16.8
RAPGEF6-215ENST00000627212 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 TLR3O15455 904 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 BBOX1O75936 387 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 GYPCP04921 128 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 CARSP49589 748 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 QRICH1Q2TAL8 776 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 KRT80Q6KB66 452 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 PPP4R3CPQ6ZMV5 832 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 IGDCC4Q8TDY8 1250 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 ATP6V1E2Q96A05 226 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 FAM118BQ9BPY3 351 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 NUP85Q9BW27 656 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 CYP4F11Q9HBI6 524 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 RBM12Q9NTZ6 932 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 KLHL11Q9NVR0 708 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 CFAP69A5D8W1 941 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 EEF1B2P24534 225 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 RNASELQ05823 741 aaKnown RBP10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 AGR3Q8TD06 166 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 FAF2Q96CS3 445 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 SLC13A1Q9BZW2 595 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 BARHL2Q9NY43 387 aa10.68□□□□□ -0.7
RAPGEF6-215ENST00000627212 SAMD9LQ8IVG5 1584 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 ARL4AP40617 200 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 NR1I3Q14994 352 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 CHMP6Q96FZ7 201 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 TGS1Q96RS0 853 aaKnown RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 ZNF341Q9BYN7 854 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 TRIM55Q9BYV6 548 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 SYNGAP1Q96PV0 1343 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 COPEO14579 308 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 NCAPHQ15003 741 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 C9orf72Q96LT7 481 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 LRRC37BQ96QE4 947 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 CCT8L2Q96SF2 557 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 MIS12Q9H081 205 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 BAG5Q9UL15 447 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 GPS1Q13098 491 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 TMED1Q13445 227 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 ART3Q13508 389 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 GRAPQ13588 217 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 HABP4Q5JVS0 413 aaKnown RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 DCAF15Q66K64 600 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 PDXDC1Q6P996 788 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 GRAPLQ8TC17 118 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 COPB2P35606 906 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 CCNI2Q6ZMN8 369 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 ZBED8Q8IZ13 594 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 SLC30A5Q8TAD4 765 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 DEPDC1BQ8WUY9 529 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 DACT3Q96B18 629 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 ZNF277Q9NRM2 450 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 HAUS2Q9NVX0 235 aa10.67□□□□□ -0.7
RAPGEF6-215ENST00000627212 hCG_1984214I3L0E3 225 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 PLEKP08567 350 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 AKR1B1P15121 316 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 KCTD2Q14681 263 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 SPOUT1Q5T280 376 aaKnown RBP10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 ADSSL1Q8N142 457 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 PROM2Q8N271 834 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 ZNF713Q8N859 430 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 FGD4Q96M96 766 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 TSC22D3Q99576 134 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 VPS11Q9H270 941 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 LRRC4Q9HBW1 653 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 KLC4Q9NSK0 619 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 ABCF3Q9NUQ8 709 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 TUBE1Q9UJT0 475 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 DBR1Q9UK59 544 aaKnown RBP10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 PNMA2Q9UL42 364 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 DUSP10Q9Y6W6 482 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 TTC4O95801 387 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 APOEP02649 317 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 KCNJ1P48048 391 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 FAM160B1Q5W0V3 765 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 CYFIP1Q7L576 1253 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 RASGRP2Q7LDG7 609 aa10.66□□□□□ -0.7
RAPGEF6-215ENST00000627212 DTX3LQ8TDB6 740 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms