RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 MGAT3Q09327 533 aa21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 DRP2Q13474 957 aa21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 KIZQ2M2Z5 673 aa21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 RHPN2Q8IUC4 686 aa21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 SYT2Q8N9I0 419 aaPredicted RBP21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 LARP4BQ92615 738 aaKnown RBP21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 PPP1R16BQ96T49 567 aa21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 PYM1Q9BRP8 204 aaKnown RBP21.22■□□□□ 0.99
SQSTM1-216ENST00000626660 ASAP2O43150 1006 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 PFKMP08237 780 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 CMA1P23946 247 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 SLC12A3P55017 1021 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 NLRP11P59045 1033 aaKnown RBP21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 DHX8Q14562 1220 aaKnown RBP21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 MCM6Q14566 821 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 MXD4Q14582 209 aaPredicted RBP21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 FAM102BQ5T8I3 360 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 MAEAQ7L5Y9 396 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 DEFB128Q7Z7B8 93 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 PRPF31Q8WWY3 499 aaKnown RBP21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 NLRP7Q8WX94 980 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 POLR3FQ9H1D9 316 aaPredicted RBP21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 IL23AQ9NPF7 189 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 BLOC1S4Q9NUP1 217 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 KCND2Q9NZV8 630 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 COL4A3BPQ9Y5P4 624 aa21.21■□□□□ 0.99
SQSTM1-216ENST00000626660 SIP14410 1827 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 MYH11P35749 1972 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 A0A1W2PQ27 194 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 A0A1W2PQ64 194 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 A0A1W2PQD8 194 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 GPC3P51654 580 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 CRYBB1P53674 252 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 TPRNQ4KMQ1 711 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 RINT1Q6NUQ1 792 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 ZNF410Q86VK4 478 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 GPBP1Q86WP2 473 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 IQUBQ8NA54 791 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 NLRP4Q96MN2 994 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 RUSC1Q9BVN2 902 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 TIPINQ9BVW5 301 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 CUEDC2Q9H467 287 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 SQORQ9Y6N5 450 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 TET1Q8NFU7 2136 aa21.2■□□□□ 0.98
SQSTM1-216ENST00000626660 A0A087X0B3 334 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 NBNO60934 754 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 GPR32O75388 356 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 GHRP10912 638 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 LAMTOR4Q0VGL1 99 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 TFDP1Q14186 410 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 MBTPS1Q14703 1052 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 FBXO47Q5MNV8 452 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 PSRC1Q6PGN9 363 aaPredicted RBP21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 C1orf186Q6ZWK4 172 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 SV2BQ7L1I2 683 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 USP38Q8NB14 1042 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 KIFAP3Q92845 792 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 DHX58Q96C10 678 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 OSMRQ99650 979 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 GDF15Q99988 308 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 UBE2OQ9C0C9 1292 aaKnown RBP21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 ADAMTS10Q9H324 1103 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 GPRC5CQ9NQ84 441 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 KCNH3Q9ULD8 1083 aa21.19■□□□□ 0.98
SQSTM1-216ENST00000626660 POLR2DO15514 142 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 CXCL10P02778 98 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 KRT18P05783 430 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 GUCY2CP25092 1073 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 ARL2P36404 184 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 NAALADL2Q58DX5 795 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 ODR4Q5SWX8 454 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 TSHZ1Q6ZSZ6 1077 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 FSIP1Q8NA03 581 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 LRRC15Q8TF66 581 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 MRPS27Q92552 414 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 ZNF668Q96K58 619 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 IFT74Q96LB3 600 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 DRC1Q96MC2 740 aa21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 GCOM2Q9BZD3 368 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-216ENST00000626660 A0A1B0GVL5 298 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 HIP1RO75146 1068 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 SRGAP2CP0DJJ0 459 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 ACRP10323 421 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 ACTN1P12814 892 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 PFKFB1P16118 471 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 LPIN1Q14693 890 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 PPP2R5AQ15172 486 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 KSR1Q8IVT5 923 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 ASAP3Q8TDY4 903 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 SEPT8Q92599 483 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 INO80BQ9C086 356 aaPredicted RBP21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 LRRC27Q9C0I9 530 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 MAGEF1Q9HAY2 307 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 CDHR5Q9HBB8 845 aa21.17■□□□□ 0.98
SQSTM1-216ENST00000626660 A0A087WZ62 844 aa21.16■□□□□ 0.98
SQSTM1-216ENST00000626660 RPS6KA5O75582 802 aa21.16■□□□□ 0.98
SQSTM1-216ENST00000626660 FGBP02675 491 aa21.16■□□□□ 0.98
SQSTM1-216ENST00000626660 DARSP14868 501 aaKnown RBP21.16■□□□□ 0.98
SQSTM1-216ENST00000626660 GLRA2P23416 452 aa21.16■□□□□ 0.98
SQSTM1-216ENST00000626660 PHKA2P46019 1235 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms