RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CDCA2Q69YH5 1023 aaPredicted RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 SPICE1Q8N0Z3 855 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 ARMC2Q8NEN0 867 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 LNX1Q8TBB1 728 aaPredicted RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 SLC35G2Q8TBE7 412 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 NAP1L3Q99457 506 aaPredicted RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 SLC5A4Q9NY91 659 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 CNOT7Q9UIV1 285 aaKnown RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 USP15Q9Y4E8 981 aaPredicted RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 A8MUI8 341 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 KRT16P08779 473 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 PDE6CP51160 858 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 CASP5P51878 434 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 ZNF131P52739 623 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
LDB3-209ENST00000623056 MAPK7Q13164 816 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
LDB3-209ENST00000623056 SF3B3Q15393 1217 aaKnown RBP15.27■□□□□ 0.04
LDB3-209ENST00000623056 DCAF17Q5H9S7 520 aaPredicted RBP15.27■□□□□ 0.04
LDB3-209ENST00000623056 HYIQ5T013 277 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 CCDC113Q9H0I3 377 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 NT5C3AQ9H0P0 336 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 CARD9Q9H257 536 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 ZHX3Q9H4I2 956 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 GRHL1Q9NZI5 618 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 DDX25Q9UHL0 483 aaKnown RBP15.27■□□□□ 0.04
LDB3-209ENST00000623056 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
LDB3-209ENST00000623056 NCANO14594 1321 aa15.27■□□□□ 0.04
LDB3-209ENST00000623056 SMNDC1O75940 238 aaKnown RBP eCLIP15.27■□□□□ 0.03
LDB3-209ENST00000623056 GFPT2O94808 682 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 XRCC5P13010 732 aaKnown RBP15.27■□□□□ 0.03
LDB3-209ENST00000623056 CYP11B2P19099 503 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 PPATQ06203 517 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 PLS1Q14651 629 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 TNFAIP8L3Q5GJ75 292 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 CROCCP2Q86T23 111 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 KIF2BQ8N4N8 673 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 OLIG1Q8TAK6 271 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 ZNF483Q8TF39 744 aaPredicted RBP15.27■□□□□ 0.03
LDB3-209ENST00000623056 TGFBRAP1Q8WUH2 860 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 RFFLQ8WZ73 363 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 TMEM109Q9BVC6 243 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 USP21Q9UK80 565 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 IGSF9BQ9UPX0 1349 aa15.27■□□□□ 0.03
LDB3-209ENST00000623056 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 MARCH6O60337 910 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 COPS2P61201 443 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 BNIP1Q12981 228 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 AUHQ13825 339 aaKnown RBP15.26■□□□□ 0.03
LDB3-209ENST00000623056 CCDC38Q502W7 563 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 CAPRIN2Q6IMN6 1127 aaKnown RBP15.26■□□□□ 0.03
LDB3-209ENST00000623056 BTNL9Q6UXG8 535 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 ERICH1Q86X53 443 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 SLC30A5Q8TAD4 765 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 CNKSR1Q969H4 720 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 KLHL29Q96CT2 875 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 EYA3Q99504 573 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 STMN4Q9H169 189 aaPredicted RBP15.26■□□□□ 0.03
LDB3-209ENST00000623056 RIOX1Q9H6W3 641 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 RASAL2Q9UJF2 1139 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 KDM3AQ9Y4C1 1321 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 POTECB2RU33 542 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
LDB3-209ENST00000623056 KRT13P13646 458 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 FERP16591 822 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 FGFR4P22455 802 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 PTGIRP43119 386 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 RPL21P46778 160 aaKnown RBP15.26■□□□□ 0.03
LDB3-209ENST00000623056 POTEBQ6S5H4 581 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 C18orf8Q96DM3 657 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 FGFR1OP2Q9NVK5 253 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 GCNT4Q9P109 453 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 DBR1Q9UK59 544 aaKnown RBP15.26■□□□□ 0.03
LDB3-209ENST00000623056 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 TRAF3IP3Q9Y228 551 aa15.26■□□□□ 0.03
LDB3-209ENST00000623056 TCP11X1B4DZS4 312 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 RASGRF2O14827 1237 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 TMEM253P0C7T8 217 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 LRRC14Q15048 493 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 UBE2SQ16763 222 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 TCERG1LQ5VWI1 586 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
LDB3-209ENST00000623056 MIS18BP1Q6P0N0 1132 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 SMIM5Q71RC9 77 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 TAOK1Q7L7X3 1001 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 GLYCTKQ8IVS8 523 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
LDB3-209ENST00000623056 MICAL1Q8TDZ2 1067 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 ARHGEF3Q9NR81 526 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 RIPK2O43353 540 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 AKAP3O75969 853 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms