RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 NTSR2O95665 410 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 ASNSP08243 561 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
GABRB3-215ENST00000622697 GCKP35557 465 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 KCNJ6P48051 423 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 ADCY2Q08462 1091 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 ITPK1Q13572 414 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
GABRB3-215ENST00000622697 CPP00450 1065 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 CCDC117Q8IWD4 279 aaPredicted RBP17.34■□□□□ 0.37
GABRB3-215ENST00000622697 ZNF564Q8TBZ8 553 aaPredicted RBP17.34■□□□□ 0.37
GABRB3-215ENST00000622697 MIS12Q9H081 205 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 GABPB2Q8TAK5 448 aaPredicted RBP17.34■□□□□ 0.37
GABRB3-215ENST00000622697 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
GABRB3-215ENST00000622697 AFG3L2Q9Y4W6 797 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
GABRB3-215ENST00000622697 PHLDB3Q6NSJ2 640 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 ERICH1Q86X53 443 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 CDHR1Q96JP9 859 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 MAP3K14Q99558 947 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 NLRP7Q8WX94 980 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 FBXL5Q9UKA1 691 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 SYNGAP1Q96PV0 1343 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 PODXLO00592 558 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 SERPINB6P35237 376 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 PMS2P54278 862 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 LRRC14Q15048 493 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 REXO1L1PQ8IX06 675 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 PYROXD1Q8WU10 500 aa17.34■□□□□ 0.37
GABRB3-215ENST00000622697 RASA1P20936 1047 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 TOB1P50616 345 aaPredicted RBP17.33■□□□□ 0.37
GABRB3-215ENST00000622697 ALCAMQ13740 583 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 PSMA2P25787 234 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.37
GABRB3-215ENST00000622697 LMBRD2Q68DH5 695 aaPredicted RBP17.33■□□□□ 0.37
GABRB3-215ENST00000622697 PODNQ7Z5L7 613 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 CDKL2Q92772 493 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 INTUQ9ULD6 942 aa17.33■□□□□ 0.37
GABRB3-215ENST00000622697 OPHN1O60890 802 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 CNGA1P29973 690 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 RAPH1Q70E73 1250 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 SRRM1Q8IYB3 904 aaKnown RBP17.33■□□□□ 0.36
GABRB3-215ENST00000622697 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.36
GABRB3-215ENST00000622697 MAGEA9P43362 315 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 C1orf54Q8WWF1 131 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 ITIH6Q6UXX5 1313 aa17.33■□□□□ 0.36
GABRB3-215ENST00000622697 ZRANB2O95218 330 aaKnown RBP eCLIP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 ZNF18P17022 549 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 ECE1P42892 770 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 SBK1Q52WX2 424 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 DPP9Q86TI2 863 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 GOLPH3Q9H4A6 298 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 ZNF543Q08ER8 600 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 SH2D4BQ5SQS7 431 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 TMED8Q6PL24 325 aaPredicted RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 CYFIP1Q7L576 1253 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 MIF4GDA9UHW6 222 aaKnown RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 USP11P51784 963 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 MKRN3Q13064 507 aaKnown RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 ORC2Q13416 577 aaPredicted RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 PDIA5Q14554 519 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 RPS6KA2Q15349 733 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 SWSAP1Q6NVH7 229 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 NUF2Q9BZD4 464 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 TACC3Q9Y6A5 838 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 SH3BP5O60239 455 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 CIAPIN1Q6FI81 312 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 DDX23Q9BUQ8 820 aaKnown RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 PRPSAP2O60256 369 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 TOM1L1O75674 476 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 PLEKP08567 350 aaPredicted RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 TROAPQ12815 778 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 GABBR1Q9UBS5 961 aa17.32■□□□□ 0.36
GABRB3-215ENST00000622697 G3BP2Q9UN86 482 aaKnown RBP17.32■□□□□ 0.36
GABRB3-215ENST00000622697 MYBP10242 640 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 SOX5P35711 763 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 ARMC9Q7Z3E5 817 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 FAM81BQ96LP2 452 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 MROH2AA6NES4 1674 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 QARSP47897 775 aaKnown RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 DNAAF3Q8N9W5 541 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 RBM12Q9NTZ6 932 aaKnown RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 EHD2Q9NZN4 543 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 WDR64B1ANS9 1081 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 PITPNM3Q9BZ71 974 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms