RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CPNE8Q86YQ8 564 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SPICE1Q8N0Z3 855 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 ATP8B4Q8TF62 1192 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 CALR3Q96L12 384 aaKnown RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 ACP6Q9NPH0 428 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 DAAM1Q9Y4D1 1078 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 CD2APQ9Y5K6 639 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 RPSAP08865 295 aaKnown RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 MTMR3Q13615 1198 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 LRRC14Q15048 493 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 TRAPPC3LQ5T215 181 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 PRR5LQ6MZQ0 368 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 OTUD6AQ7L8S5 288 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 HVCN1Q96D96 273 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SEMA4AQ9H3S1 761 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 COG5Q9UP83 839 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 TGFB1I1O43294 461 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 MMEP08473 750 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 VIMP08670 466 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 SPIRE1Q08AE8 756 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 SYT2Q8N9I0 419 aaPredicted RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 SLC20A1Q8WUM9 679 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 KRT35Q92764 455 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 THRAP3Q9Y2W1 955 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 PDXKO00764 312 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 CHUKO15111 745 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 GDF11O95390 407 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 TNFAIP3P21580 790 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 KCNJ1P48048 391 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 SYCE1Q8N0S2 351 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 CERS5Q8N5B7 392 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 PRMT1Q99873 361 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 ELAC2Q9BQ52 826 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 SH2D3AQ9BRG2 576 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 TYW1Q9NV66 732 aaKnown RBP17.09■□□□□ 0.33
NPHP4-211ENST00000622020 BAIAP2L1Q9UHR4 511 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 RABGAP1Q9Y3P9 1069 aa17.09■□□□□ 0.33
NPHP4-211ENST00000622020 FAM13AO94988 1023 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.33
NPHP4-211ENST00000622020 PSEN1P49768 467 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 JAM2P57087 298 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.33
NPHP4-211ENST00000622020 FAM228AQ86W67 206 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 ERMNQ8TAM6 284 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 EPS8L3Q8TE67 593 aaKnown RBP17.08■□□□□ 0.33
NPHP4-211ENST00000622020 TATDN2Q93075 761 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.33
NPHP4-211ENST00000622020 BTBD6Q96KE9 485 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 XPO6Q96QU8 1125 aaKnown RBP17.08■□□□□ 0.33
NPHP4-211ENST00000622020 PCIF1Q9H4Z3 704 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.33
NPHP4-211ENST00000622020 CHRM1P11229 460 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-211ENST00000622020 SOX5P35711 763 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 PRKCIP41743 596 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 PMS2P54278 862 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 SNCBQ16143 134 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 GPATCH4Q5T3I0 446 aaKnown RBP17.08■□□□□ 0.32
NPHP4-211ENST00000622020 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-211ENST00000622020 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 ETNPPLQ8TBG4 499 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 TCP11Q8WWU5 503 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 CHMP6Q96FZ7 201 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 FAM114A2Q9NRY5 505 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 CTTNBP2NLQ9P2B4 639 aa17.08■□□□□ 0.32
NPHP4-211ENST00000622020 TPX2Q9ULW0 747 aaKnown RBP17.08■□□□□ 0.32
NPHP4-211ENST00000622020 BTNL10A8MVZ5 291 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 TISP43B9A030 160 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 MSH4O15457 936 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 DDX3YO15523 660 aaKnown RBP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 IL1R1P14778 569 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 DRD4P21917 467 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 RPA1P27694 616 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 NOVP48745 357 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 ERP44Q9BS26 406 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 PKD2L1Q9P0L9 805 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 IGKV6D-41A0A0C4DH26 115 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-211ENST00000622020 FERP16591 822 aa17.07■□□□□ 0.32
NPHP4-211ENST00000622020 NT5C2P49902 561 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms