RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 VEGFBP49765 207 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 ALCAMQ13740 583 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 SAAL1Q96ER3 474 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 NR3C1P04150 777 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 PLS3P13797 630 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 KRT9P35527 623 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 NLRP11P59045 1033 aaKnown RBP13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 TWF2Q6IBS0 349 aaKnown RBP13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 LENG1Q96BZ8 264 aaPredicted RBP13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 FSCN1Q16658 493 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 ANKRD40Q6AI12 368 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CDR2LQ86X02 465 aaPredicted RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 ADAMTSL1Q8N6G6 1762 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CCNE2O96020 404 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 RFC5P40937 340 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 GIT2Q14161 759 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 FAM213AQ9BRX8 229 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 GCOM2Q9BZD3 368 aaPredicted RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 AKR1B15C9JRZ8 316 aaPredicted RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CSDE1O75534 798 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 SSR1P43307 286 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 ZNF568Q3ZCX4 644 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 TMX1Q9H3N1 280 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 PRKAG2Q9UGJ0 569 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 GPR25O00155 361 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 SLC26A4O43511 780 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 LGALS2P05162 132 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CCDC172P0C7W6 258 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 MXD4Q14582 209 aaPredicted RBP13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
SCAMP1-207ENST00000621999 CCP110O43303 1012 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 LACTBP83111 547 aaPredicted RBP13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 CCDC42Q96M95 316 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 LSM14BQ9BX40 385 aaKnown RBP13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 ADKP55263 362 aaKnown RBP13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 ABRAQ8N0Z2 381 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 XXYLT1Q8NBI6 393 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 C2orf40Q9H1Z8 148 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 VAV3Q9UKW4 847 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 TCHHQ07283 1943 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 VTNP04004 478 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 ECM1Q16610 540 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 UGCGQ16739 394 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 SPOUT1Q5T280 376 aaKnown RBP13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 IER5Q5VY09 327 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 ADSSL1Q8N142 457 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 TIAM2Q8IVF5 1701 aa13.66□□□□□ -0.22
SCAMP1-207ENST00000621999 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 TNNC2P02585 160 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 PPM1KQ8N3J5 372 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 PCSK9Q8NBP7 692 aaKnown RBP13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 ARRDC4Q8NCT1 418 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 NPLOC4Q8TAT6 608 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 RRN3P2A6NIE6 340 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 PRKCBP05771 671 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 SPATA31C1P0DKV0 1188 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 KCNA2P16389 499 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 SLC26A2P50443 739 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 DNA2P51530 1060 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 KIZQ2M2Z5 673 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 TMEM119Q4V9L6 283 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 GBP6Q6ZN66 633 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 C17orf102A2RUQ5 167 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 MAP2K2P36507 400 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 MRPL4Q9BYD3 311 aaKnown RBP13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 MUTP22033 750 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 ABCD1P33897 745 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 KRT31Q15323 416 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 MAN2A1Q16706 1144 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 EXOC3L4Q17RC7 722 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 DUSP28Q4G0W2 176 aa13.65□□□□□ -0.22
SCAMP1-207ENST00000621999 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms