RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
SRGAP2C-205ENST00000617209 LINC01553A4QN01 128 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 ZBTB39O15060 712 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 ASAP2O43150 1006 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 RPA1P27694 616 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 PRPHP41219 470 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 POLGP54098 1239 aaPredicted RBP17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 TMEM266Q2M3C6 531 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 XKR9Q5GH70 373 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 SLC24A5Q71RS6 500 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 FAM228AQ86W67 206 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 SNX21Q969T3 373 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 TGS1Q96RS0 853 aaKnown RBP17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 YME1L1Q96TA2 773 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 INO80BQ9C086 356 aaPredicted RBP17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 C1orf112Q9NSG2 853 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
SRGAP2C-205ENST00000617209 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 DGKIO75912 1065 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 STAG3L1P0CL83 205 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 FAM189BP81408 668 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 ADGRE1Q14246 886 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 DSC3Q14574 896 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 NBR1Q14596 966 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 NPAS4Q8IUM7 802 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 IGSF22Q8N9C0 903 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 TCP11Q8WWU5 503 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 ZNF689Q96CS4 500 aaPredicted RBP17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 NACC1Q96RE7 527 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 GCOM2Q9BZD3 368 aaPredicted RBP17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 RAB34Q9BZG1 259 aa17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
SRGAP2C-205ENST00000617209 C9IYK1 514 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 MGEA5O60502 916 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 DGAT1O75907 488 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 SARSP49591 514 aaKnown RBP17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 RARRES1P49788 294 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 BRAPQ7Z569 592 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 RHPN2Q8IUC4 686 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 PRPF31Q8WWY3 499 aaKnown RBP17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 NLRP7Q8WX94 980 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 PPP1R16BQ96T49 567 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 ADAM2Q99965 735 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 LRWD1Q9UFC0 647 aa17.26■□□□□ 0.35
SRGAP2C-205ENST00000617209 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 A0A087WZ62 844 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 DENND3A2RUS2 1198 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 MED24O75448 989 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 POU5F1BQ06416 359 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 EMC2Q15006 297 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 HAUS3Q68CZ6 603 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 MAFAQ8NHW3 353 aaPredicted RBP17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 PIGOQ8TEQ8 1089 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 PSPC1Q8WXF1 523 aaKnown RBP17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 ARNTL2Q8WYA1 636 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 MTRQ99707 1265 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 FDXACB1Q9BRP7 624 aaPredicted RBP17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 IFT122Q9HBG6 1241 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 CHST12Q9NRB3 414 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
SRGAP2C-205ENST00000617209 NLRC5Q86WI3 1866 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 ATP2C1P98194 919 aaPredicted RBP17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 MXD4Q14582 209 aaPredicted RBP17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 SPRED2Q7Z698 418 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 FIBCD1Q8N539 461 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 SCLT1Q96NL6 688 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 TRAIPQ9BWF2 469 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 CERS4Q9HA82 394 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 XPNPEP1Q9NQW7 623 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 LMCD1Q9NZU5 365 aa17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
SRGAP2C-205ENST00000617209 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 FNDC1Q4ZHG4 1894 aaPredicted RBP17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 SYT1P21579 422 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 PCBP1Q15365 356 aaKnown RBP eCLIP17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 IL17AQ16552 155 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 KSR1Q8IVT5 923 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 KCTD17Q8N5Z5 321 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 CLP1Q92989 425 aaKnown RBP17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 ZNF668Q96K58 619 aaPredicted RBP17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 TMEM161AQ9NX61 479 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 RWDD3Q9Y3V2 267 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 PCDHB7Q9Y5E2 793 aa17.23■□□□□ 0.35
SRGAP2C-205ENST00000617209 RFXAPO00287 272 aa17.22■□□□□ 0.35
SRGAP2C-205ENST00000617209 LPXNO60711 386 aa17.22■□□□□ 0.35
SRGAP2C-205ENST00000617209 RB1P06400 928 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms