RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 C12orf60Q5U649 245 aa11.23□□□□□ -0.61
TPT1-214ENST00000616577 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
TPT1-214ENST00000616577 ZNF564Q8TBZ8 553 aaPredicted RBP11.23□□□□□ -0.61
TPT1-214ENST00000616577 NSUN4Q96CB9 384 aaKnown RBP11.23□□□□□ -0.61
TPT1-214ENST00000616577 CDHR1Q96JP9 859 aa11.23□□□□□ -0.61
TPT1-214ENST00000616577 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
TPT1-214ENST00000616577 VCX3AQ9NNX9 186 aa11.23□□□□□ -0.61
TPT1-214ENST00000616577 NARFQ9UHQ1 456 aa11.23□□□□□ -0.61
TPT1-214ENST00000616577 PRPSAP2O60256 369 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 PPP1R37O75864 691 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 PRELPP51888 382 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 CCNI2Q6ZMN8 369 aaPredicted RBP11.22□□□□□ -0.61
TPT1-214ENST00000616577 FAM160B2Q86V87 743 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 INTS2Q9H0H0 1204 aaKnown RBP11.22□□□□□ -0.61
TPT1-214ENST00000616577 SPATS2LQ9NUQ6 558 aaKnown RBP11.22□□□□□ -0.61
TPT1-214ENST00000616577 NPHP3-ACAD11A0A0J9YXS1 232 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 F5H6K3 240 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 ZBED1O96006 694 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 SKIP12755 728 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 KLRC3Q07444 240 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 TRIM59Q8IWR1 403 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 HIPK4Q8NE63 616 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 CYTH2Q99418 400 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 NUP85Q9BW27 656 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 ZNF341Q9BYN7 854 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 SLC38A10Q9HBR0 1119 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 ZNF277Q9NRM2 450 aaPredicted RBP11.22□□□□□ -0.61
TPT1-214ENST00000616577 COL15A1P39059 1388 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 PSMA2P25787 234 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 CRKP46108 304 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 KCTD2Q14681 263 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 PPP1R2P3Q6NXS1 205 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 SMIM5Q71RC9 77 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 HDAC11Q96DB2 347 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 FUCA2Q9BTY2 467 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 SCINQ9Y6U3 715 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 ITIH6Q6UXX5 1313 aa11.22□□□□□ -0.61
TPT1-214ENST00000616577 RHOBTB3O94955 611 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 TMEM270Q6UE05 265 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 CLEC10AQ8IUN9 316 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 REXO1L1PQ8IX06 675 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 RFFLQ8WZ73 363 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 HSPH1Q92598 858 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 PPWD1Q96BP3 646 aaKnown RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 FIS1Q9Y3D6 152 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 TJP3O95049 919 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 PSAPP07602 524 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 CCND2P30279 289 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 ARL4AP40617 200 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 KLK7P49862 253 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 VAMP7P51809 220 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 POLE2P56282 527 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 JADE1Q6IE81 842 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 C1orf54Q8WWF1 131 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 SAAL1Q96ER3 474 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 CHMP6Q96FZ7 201 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 NLRP4Q96MN2 994 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 FAM213AQ9BRX8 229 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 KRT14P02533 472 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 NCF2P19878 526 aaPredicted RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 MARK3P27448 753 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 CHRNA3P32297 505 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 MTMR1Q13613 665 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 SLC18A3Q16572 532 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 EPM2AIP1Q7L775 607 aaPredicted RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 RBM12Q9NTZ6 932 aaKnown RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 RGL1Q9NZL6 768 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 PPARGC1AQ9UBK2 798 aaKnown RBP11.21□□□□□ -0.61
TPT1-214ENST00000616577 SCOCQ9UIL1 159 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.61
TPT1-214ENST00000616577 MED7O43513 233 aa11.21□□□□□ -0.62
TPT1-214ENST00000616577 NMT1P30419 496 aaKnown RBP11.21□□□□□ -0.62
TPT1-214ENST00000616577 PDIA6Q15084 440 aa11.21□□□□□ -0.62
TPT1-214ENST00000616577 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.62
TPT1-214ENST00000616577 SYT2Q8N9I0 419 aaPredicted RBP11.21□□□□□ -0.62
TPT1-214ENST00000616577 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.62
TPT1-214ENST00000616577 HEXIM2Q96MH2 286 aaKnown RBP11.21□□□□□ -0.62
TPT1-214ENST00000616577 CCDC68Q9H2F9 335 aa11.21□□□□□ -0.62
TPT1-214ENST00000616577 MYMKA6NI61 221 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 CFLARO15519 480 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 TMPRSS15P98073 1019 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 KAZALD1Q96I82 304 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 RMDN3Q96TC7 470 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 PLA2G12BQ9BX93 195 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 ABCB11O95342 1321 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
TPT1-214ENST00000616577 REREQ9P2R6 1566 aa11.2□□□□□ -0.62
TPT1-214ENST00000616577 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms