RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.38
CDH5-208ENST00000614547 ZNF804BA4D1E1 1349 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 AFF2P51816 1311 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 RASSF9O75901 435 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 FERP16591 822 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 ITIH3Q06033 890 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 KYNUQ16719 465 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 TSNAXIP1Q2TAA8 658 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 KIAA0825Q8IV33 1275 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 MCUR1Q96AQ8 359 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 C9orf72Q96LT7 481 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 LZTS2Q9BRK4 669 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 PPP1R9AQ9ULJ8 1098 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 BZW2Q9Y6E2 419 aaKnown RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 RSPH10B2B2RC85 870 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 NR3C1P04150 777 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 RSPH10BP0C881 870 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 DRD4P21917 467 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 HOXA13P31271 388 aaPredicted RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 ZRSR2Q15696 482 aaKnown RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 HGSNATQ68CP4 663 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 DTX3LQ8TDB6 740 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 TSC22D3Q99576 134 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 ERP44Q9BS26 406 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 SLITRK6Q9H5Y7 841 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 ADCY2Q08462 1091 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 SGO2Q562F6 1265 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 ERICH1Q86X53 443 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 RUBCNQ92622 972 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 STMN2Q93045 179 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 ANAPC4Q9UJX5 808 aa12.7□□□□□ -0.38
CDH5-208ENST00000614547 USP15Q9Y4E8 981 aaPredicted RBP12.7□□□□□ -0.38
CDH5-208ENST00000614547 PASKQ96RG2 1323 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 UFL1O94874 794 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 BAG2O95816 211 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 NQO1P15559 274 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 NMT1P30419 496 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 RNASELQ05823 741 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 C12orf60Q5U649 245 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 CTNNAL1Q9UBT7 734 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 TTC7AQ9ULT0 858 aaPredicted RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 USP17L10C9JJH3 530 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 FTLP02792 175 aaPredicted RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 SCNN1DP51172 638 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 DDR1Q08345 913 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 ZC2HC1CQ53FD0 456 aaPredicted RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 SPATA21Q7Z572 469 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 THAP2Q9H0W7 228 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 LRRC4CQ9HCJ2 640 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 PJA2O43164 708 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 CFBP00751 764 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 TARSP26639 723 aaKnown RBP12.69□□□□□ -0.38
CDH5-208ENST00000614547 PSMD2Q13200 908 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 PROM2Q8N271 834 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 ZNF653Q96CK0 615 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 TMEM237Q96Q45 408 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 ATP6V0A4Q9HBG4 840 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 RGL1Q9NZL6 768 aa12.69□□□□□ -0.38
CDH5-208ENST00000614547 GOLGA8IPA6NC78 632 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 GOLGA8JA6NMD2 632 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 ECEL1O95672 775 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 APBA3O96018 575 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 LMNB1P20700 586 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
CDH5-208ENST00000614547 THEMIS2Q5TEJ8 643 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
CDH5-208ENST00000614547 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.68□□□□□ -0.38
CDH5-208ENST00000614547 MYH13Q9UKX3 1938 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 AP1G2O75843 785 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 SP4Q02446 784 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 YTHDF3Q7Z739 585 aaKnown RBP12.68□□□□□ -0.38
CDH5-208ENST00000614547 FAM178BQ8IXR5 827 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 C15orf41Q9Y2V0 281 aa12.68□□□□□ -0.38
CDH5-208ENST00000614547 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms