RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 RBM41Q96IZ5 413 aaKnown RBP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 ISCUQ9H1K1 167 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 TMEM60Q9H2L4 133 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 PXDNQ92626 1479 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 ZBTB22O15209 634 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 TJP3O95049 919 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 LRRC31Q6UY01 552 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 TRIM4Q9C037 500 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 OPHN1O60890 802 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 KLK7P49862 253 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 QRICH1Q2TAL8 776 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 LRRIQ3A6PVS8 624 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 RASA4BC9J798 803 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 H3BQF6 201 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 CLGNO14967 610 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 FOXP2O15409 715 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 RASA4O43374 803 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 FTLP02792 175 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 GEN1Q17RS7 908 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 SLC7A3Q8WY07 619 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 CNKSR1Q969H4 720 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 GRAMD1AQ96CP6 724 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 NUP85Q9BW27 656 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 SCOCQ9UIL1 159 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 EYA4O95677 639 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 UCHL3P15374 230 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 VAMP7P51809 220 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 CASP7P55210 303 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 EPM2AIP1Q7L775 607 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 RNF34Q969K3 372 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 SNF8Q96H20 258 aa11.71□□□□□ -0.53
CDC42EP3-206ENST00000611976 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 ESYT2A0FGR8 921 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 RAD51CO43502 376 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 MED7O43513 233 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 KDM7AQ6ZMT4 941 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 TAB3Q8N5C8 712 aaPredicted RBP11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 DYDC2Q96IM9 177 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 SAYSD1Q9NPB0 183 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 HESX1Q9UBX0 185 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 ANGPTL2Q9UKU9 493 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 MAD1L1Q9Y6D9 718 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZNF233A6NK53 670 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 GCLMP48507 274 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 JAK3P52333 1124 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 RBBP5Q15291 538 aaKnown RBP11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 SH2D4BQ5SQS7 431 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 BSPRYQ5W0U4 402 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 MIS18BP1Q6P0N0 1132 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 PADI6Q6TGC4 694 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 PDIK1LQ8N165 341 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 PYROXD1Q8WU10 500 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 STK33Q9BYT3 514 aa11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM6Q9C030 488 aaPredicted RBP11.71□□□□□ -0.54
CDC42EP3-206ENST00000611976 GOLGA8IPA6NC78 632 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 GOLGA8JA6NMD2 632 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 UBE2Q2LH0YL09 131 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 CRCPO75575 148 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZRANB2O95218 330 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 FAM107AO95990 144 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 MYBL1P10243 752 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 STAT3P40763 770 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 YARSP54577 528 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 SEPT14Q6ZU15 432 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 PDZD4Q76G19 769 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 C3orf20Q8ND61 904 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 NUF2Q9BZD4 464 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 MAP3K7O43318 606 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 KRT14P02533 472 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 BRAFP15056 766 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 CCND2P30279 289 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 HSPA9P38646 679 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 HERVK_113P62684 666 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 DCAF15Q66K64 600 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZNF449Q6P9G9 518 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 PCGF5Q86SE9 256 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 CCT6BQ92526 530 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 ANKRD36BP1Q96IX9 119 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 DNAJC17Q9NVM6 304 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 PEX3P56589 373 aa11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 BASP1P80723 227 aaKnown RBP11.7□□□□□ -0.54
CDC42EP3-206ENST00000611976 RCN2Q14257 317 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms