RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 RBM23Q86U06 439 aaKnown RBP18.02■□□□□ 0.48
SGMS1-209ENST00000609445 COLGALT1Q8NBJ5 622 aa18.02■□□□□ 0.48
SGMS1-209ENST00000609445 RDM1Q8NG50 284 aa18.02■□□□□ 0.48
SGMS1-209ENST00000609445 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
SGMS1-209ENST00000609445 CWH43Q9H720 699 aa18.02■□□□□ 0.48
SGMS1-209ENST00000609445 DDX25Q9UHL0 483 aaKnown RBP18.02■□□□□ 0.48
SGMS1-209ENST00000609445 PCDHB12Q9Y5F1 795 aa18.02■□□□□ 0.48
SGMS1-209ENST00000609445 MBTPS2O43462 519 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 CSDE1O75534 798 aaKnown RBP18.01■□□□□ 0.47
SGMS1-209ENST00000609445 DARSP14868 501 aaKnown RBP18.01■□□□□ 0.47
SGMS1-209ENST00000609445 NRIP1P48552 1158 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 ZP2Q05996 745 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 XKR3Q5GH77 459 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 GALNT17Q6IS24 598 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 MOXD1Q6UVY6 613 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 NLRP7Q8WX94 980 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 CEP89Q96ST8 783 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 PHF20Q9BVI0 1012 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
SGMS1-209ENST00000609445 ELAC1Q9H777 363 aaKnown RBP18.01■□□□□ 0.47
SGMS1-209ENST00000609445 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
SGMS1-209ENST00000609445 FAM50BQ9Y247 325 aa18.01■□□□□ 0.47
SGMS1-209ENST00000609445 DDX11L8A8MPP1 907 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 EML1O00423 815 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 PFKFB2O60825 505 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 FGF18O76093 207 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 CTDNEP1O95476 244 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
SGMS1-209ENST00000609445 NDUFV1P49821 464 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 ECHDC2Q86YB7 292 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 THNSL1Q8IYQ7 743 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 FAM177A1Q8N128 213 aaPredicted RBP18■□□□□ 0.47
SGMS1-209ENST00000609445 RNF169Q8NCN4 708 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 OXER1Q8TDS5 423 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 PPP2R3CQ969Q6 453 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 NIFKQ9BYG3 293 aaKnown RBP18■□□□□ 0.47
SGMS1-209ENST00000609445 TMEM117Q9H0C3 514 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 AAASQ9NRG9 546 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 CD207Q9UJ71 328 aa18■□□□□ 0.47
SGMS1-209ENST00000609445 STK36Q9NRP7 1315 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 CCDC194A0A1B0GVG4 234 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 GPR37L1O60883 481 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 CDKL5O76039 1030 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 AK2P54819 239 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 ERVFC1P60507 584 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 SMAD2Q15796 467 aaKnown RBP17.99■□□□□ 0.47
SGMS1-209ENST00000609445 PLA2G4FQ68DD2 849 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 ADHFE1Q8IWW8 467 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 EFHBQ8N7U6 833 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 MSLNLQ96KJ4 702 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 CASD1Q96PB1 797 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 CLEC1BQ9P126 229 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 PRKAG3Q9UGI9 489 aa17.99■□□□□ 0.47
SGMS1-209ENST00000609445 A0A087WZ62 844 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 C19orf67A6NJJ6 358 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 PER2O15055 1255 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 GLP2RO95838 553 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 PBX3P40426 434 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 RBM10P98175 930 aaKnown RBP17.98■□□□□ 0.47
SGMS1-209ENST00000609445 UBE3AQ05086 875 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 SMAD4Q13485 552 aaKnown RBP17.98■□□□□ 0.47
SGMS1-209ENST00000609445 EARS2Q5JPH6 523 aaKnown RBP17.98■□□□□ 0.47
SGMS1-209ENST00000609445 CLLU1OSQ5K130 101 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 ANO5Q75V66 913 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 ZNF710Q8N1W2 664 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 MICAL1Q8TDZ2 1067 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 FDXACB1Q9BRP7 624 aaPredicted RBP17.98■□□□□ 0.47
SGMS1-209ENST00000609445 KCNMB3Q9NPA1 279 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 TLR9Q9NR96 1032 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 VAV3Q9UKW4 847 aa17.98■□□□□ 0.47
SGMS1-209ENST00000609445 BARX2Q9UMQ3 279 aaPredicted RBP17.98■□□□□ 0.47
SGMS1-209ENST00000609445 IGKV6-21A0A0C4DH24 114 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 LARGE1O95461 756 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-209ENST00000609445 LAG3P18627 525 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 PSMC5P62195 406 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 PIK3AP1Q6ZUJ8 805 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 NECAB1Q8N987 351 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 HELQQ8TDG4 1101 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 GCOM2Q9BZD3 368 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-209ENST00000609445 TLE6Q9H808 572 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
SGMS1-209ENST00000609445 SUCLA2Q9P2R7 463 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-209ENST00000609445 ORC3Q9UBD5 711 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-209ENST00000609445 FSCN2O14926 492 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 HOXA2O43364 376 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 CCNT1O60563 726 aaKnown RBP17.96■□□□□ 0.47
SGMS1-209ENST00000609445 MAFO75444 373 aaPredicted RBP17.96■□□□□ 0.47
SGMS1-209ENST00000609445 NPEPPSP55786 919 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 PPP2R5CQ13362 524 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 PLPP4Q5VZY2 271 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 KCNT2Q6UVM3 1135 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
SGMS1-209ENST00000609445 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms