RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 CYP2C19P33261 490 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 SOX10P56693 466 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 KCNA1Q09470 495 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
VRK3-218ENST00000600031 TCP11X2Q5H9J9 407 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 FAM102BQ5T8I3 360 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 ZNF720Q7Z2F6 126 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 GLG1Q92896 1179 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 NIFKQ9BYG3 293 aaKnown RBP16.71■□□□□ 0.27
VRK3-218ENST00000600031 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 ADCY6O43306 1168 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 DGAT1O75907 488 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 KIF20AO95235 890 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 MARK3P27448 753 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 PSMC4P43686 418 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 KRT31Q15323 416 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 DRC1Q96MC2 740 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 APBA2Q99767 749 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 XPNPEP1Q9NQW7 623 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 LARSQ9P2J5 1176 aaKnown RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 PLS3P13797 630 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 FCGRTP55899 365 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 HTRA3P83110 453 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 PTPN21Q16825 1174 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
VRK3-218ENST00000600031 OLFML2BQ68BL8 750 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 PLPPR4Q7Z2D5 763 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 KSR1Q8IVT5 923 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 AFG1LQ8WV93 481 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 TSG101Q99816 390 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 NRBP2Q9NSY0 501 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
VRK3-218ENST00000600031 LRRC10BA6NIK2 292 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 EIF3DO15371 548 aaKnown RBP eCLIP16.69■□□□□ 0.26
VRK3-218ENST00000600031 IGHA2P01877 340 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 CAP1Q01518 475 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 NR1I3Q14994 352 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 TARBP2Q15633 366 aaKnown RBP16.69■□□□□ 0.26
VRK3-218ENST00000600031 SYT10Q6XYQ8 523 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 LRRC55Q6ZSA7 311 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 PPTC7Q8NI37 304 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 PHLPP2Q6ZVD8 1323 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
VRK3-218ENST00000600031 PEX3P56589 373 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 SPAG1Q07617 926 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 STRA6Q9BX79 667 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 ATP6V0A4Q9HBG4 840 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 TAB2Q9NYJ8 693 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
VRK3-218ENST00000600031 PPP1R37O75864 691 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 VEGFBP49765 207 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
VRK3-218ENST00000600031 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
VRK3-218ENST00000600031 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 PLCB4Q15147 1175 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 MCPH1Q8NEM0 835 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 BSNDQ8WZ55 320 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 SMARCAD1Q9H4L7 1026 aa16.68■□□□□ 0.26
VRK3-218ENST00000600031 DHX33Q9H6R0 707 aaKnown RBP16.68■□□□□ 0.26
VRK3-218ENST00000600031 ZMYM2Q9UBW7 1377 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 K7ENM7 598 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 NKRFO15226 690 aaKnown RBP eCLIP16.67■□□□□ 0.26
VRK3-218ENST00000600031 TEX33O43247 280 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 EEF1GP26641 437 aaKnown RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 COPB1P53618 953 aaKnown RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 FKBP3Q00688 224 aaKnown RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 EMC2Q15006 297 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 OR6J1Q8NGC5 347 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 ATP8B4Q8TF62 1192 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 BBXQ8WY36 941 aaPredicted RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 KIFAP3Q92845 792 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 FAM167AQ96KS9 214 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 CTAGE1Q96RT6 745 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 VPS16Q9H269 839 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 MAGEC2Q9UBF1 373 aaPredicted RBP16.67■□□□□ 0.26
VRK3-218ENST00000600031 TRAF3IP3Q9Y228 551 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 TGFB1I1O43294 461 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 TRPA1O75762 1119 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 LGALS2P05162 132 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 IRF5Q13568 498 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 ELF2Q15723 593 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms