RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 USP24Q9UPU5 2620 aa15.68■□□□□ 0.1
SHKBP1-208ENST00000595726 hCG_1642624A0A1W2PR95 340 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 ZBTB42B2RXF5 422 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 MAFGO15525 162 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 HOXA2O43364 376 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 ALDH7A1P49419 539 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 TRMT1LQ7Z2T5 733 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 CMTR1Q8N1G2 835 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 SUMF1Q8NBK3 374 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 MYL10Q9BUA6 226 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 ZBP1Q9H171 429 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 TBC1D17Q9HA65 648 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 WNT16Q9UBV4 365 aa15.67■□□□□ 0.1
SHKBP1-208ENST00000595726 POTEMA6NI47 508 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 DDX39AO00148 427 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 BACH1O14867 736 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 HBP1O60381 514 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 ATG7O95352 703 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 CCNE2O96020 404 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 ATP4AP20648 1035 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 TBC1D8BQ0IIM8 1120 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 WTAPQ15007 396 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 POTEGQ6S5H5 508 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 BCL7CQ8WUZ0 217 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 TMEM169Q96HH4 297 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 MXRA8Q9BRK3 442 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 SDF4Q9BRK5 362 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 DLGAP2Q9P1A6 1054 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 TAF6LQ9Y6J9 622 aa15.66■□□□□ 0.1
SHKBP1-208ENST00000595726 BAHCC1Q9P281 2608 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 MYBP10242 640 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 CTSAP10619 480 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 ZSCAN20P17040 1043 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 FGFR4P22455 802 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 ATXN1P54253 815 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 BMS1Q14692 1282 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 LONRF3Q496Y0 759 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 FAM43BQ6ZT52 329 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 CATIPQ7Z7H3 387 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 C1orf210Q8IVY1 113 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 SLC44A3Q8N4M1 653 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 ST13P5Q8NFI4 369 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 SPZ1Q9BXG8 430 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 IGSF9Q9P2J2 1179 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 EVPLQ92817 2033 aa15.65■□□□□ 0.1
SHKBP1-208ENST00000595726 ERICH2A1L162 156 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 SPDYE3A6NKU9 549 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 ZC3H11AO75152 810 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 LRRN2O75325 713 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 PLEKHA8P1O95397 391 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 C22orf31O95567 290 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 GLULP15104 373 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 CHMLP26374 656 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 CLCN3P51790 818 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 NLRP11P59045 1033 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 TRDNQ13061 729 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 ZNF484Q5JVG2 852 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 SWSAP1Q6NVH7 229 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 PDXDC2PQ6P474 469 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 ZC3H14Q6PJT7 736 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 ABHD15Q6UXT9 468 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 ZNF598Q86UK7 904 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 CCDC60Q8IWA6 550 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 MAML2Q8IZL2 1156 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 SRBD1Q8N5C6 995 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 GPR152Q8TDT2 470 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 PGBD1Q96JS3 809 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 VN1R3Q9BXE9 311 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 SFXN1Q9H9B4 322 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 AGO4Q9HCK5 861 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 SEC63Q9UGP8 760 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 RALYQ9UKM9 306 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 SIT1Q9Y3P8 196 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 IRAK3Q9Y616 596 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 NFASCO94856 1347 aa15.64■□□□□ 0.09
SHKBP1-208ENST00000595726 DENND4AQ7Z401 1863 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 CACNA1IQ9P0X4 2223 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 DCDC2BA2VCK2 349 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 SSBP05455 408 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 KLRC2P26717 231 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 GBP2P32456 591 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 SLC26A2P50443 739 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 ST3GAL2Q16842 350 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 ADAMTS10Q9H324 1103 aa15.63■□□□□ 0.09
SHKBP1-208ENST00000595726 A0A0U1RQF3 1178 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 CSDE1O75534 798 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 CLCN4P51793 760 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 PTPN14Q15678 1187 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 FAM160B1Q5W0V3 765 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 DDX53Q86TM3 631 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 CKAP2LQ8IYA6 745 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 CCDC82Q8N4S0 544 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 IGDCC4Q8TDY8 1250 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 IGSF21Q96ID5 467 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms