RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TRPV6Q9H1D0 765 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 POLR3FQ9H1D9 316 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-211ENST00000589753 NUP62CLQ9H1M0 184 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 GPRC5CQ9NQ84 441 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 TLR3O15455 904 aaKnown RBP16.82■□□□□ 0.28
ATG4D-211ENST00000589753 PQBP1O60828 265 aaKnown RBP16.82■□□□□ 0.28
ATG4D-211ENST00000589753 FAM13AO94988 1023 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 IDEP14735 1019 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 ARL2P36404 184 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 DPYDQ12882 1025 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 MAPK7Q13164 816 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 PTK7Q13308 1070 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 DRP2Q13474 957 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 TRIM60Q495X7 471 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 ANKRD33Q7Z3H0 272 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 PSPC1Q8WXF1 523 aaKnown RBP16.82■□□□□ 0.28
ATG4D-211ENST00000589753 TOX2Q96NM4 488 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 FAM49AQ9H0Q0 323 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-211ENST00000589753 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
ATG4D-211ENST00000589753 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-211ENST00000589753 DCDC2CA8MYV0 355 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 RSPH10B2B2RC85 870 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 TRAK2O60296 914 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 CD4P01730 458 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 RPLP2P05387 115 aaKnown RBP16.81■□□□□ 0.28
ATG4D-211ENST00000589753 RSPH10BP0C881 870 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 RTP1P59025 263 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 LRRC26Q2I0M4 334 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 CCDC65Q8IXS2 484 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 DAW1Q8N136 415 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 NME8Q8N427 588 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 DNAJB3Q8WWF6 145 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 PRPF31Q8WWY3 499 aaKnown RBP16.81■□□□□ 0.28
ATG4D-211ENST00000589753 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-211ENST00000589753 PANK4Q9NVE7 773 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 AKT3Q9Y243 479 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 ATP11BQ9Y2G3 1177 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
ATG4D-211ENST00000589753 KIAA0100Q14667 2235 aaKnown RBP16.8■□□□□ 0.28
ATG4D-211ENST00000589753 PVALEFA0A1B0GWK0 134 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 FRMD3A2A2Y4 597 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 ASAP2O43150 1006 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 SMC2O95347 1197 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 RPN1P04843 607 aaKnown RBP16.8■□□□□ 0.28
ATG4D-211ENST00000589753 PLS3P13797 630 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 GAP43P17677 238 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 ZNF131P52739 623 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 TLE2Q04725 743 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 MXD4Q14582 209 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-211ENST00000589753 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
ATG4D-211ENST00000589753 RSPH3Q86UC2 560 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 MYCT1Q8N699 235 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 ASAP3Q8TDY4 903 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 ERCC4Q92889 916 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-211ENST00000589753 IFT74Q96LB3 600 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 C17orf75Q9HAS0 396 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 PARVGQ9HBI0 331 aa16.8■□□□□ 0.28
ATG4D-211ENST00000589753 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
ATG4D-211ENST00000589753 TRIP12Q14669 1992 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-211ENST00000589753 KLRC4O43908 158 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 VTNP04004 478 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 GLRA2P23416 452 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 CDC42EP1Q00587 391 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 LAMTOR4Q0VGL1 99 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 COASYQ13057 564 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 HERC4Q5GLZ8 1057 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-211ENST00000589753 RPAINQ86UA6 219 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 DHX38Q92620 1227 aaKnown RBP16.79■□□□□ 0.28
ATG4D-211ENST00000589753 WNT8BQ93098 351 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 SMARCE1Q969G3 411 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 CCDC47Q96A33 483 aaKnown RBP16.79■□□□□ 0.28
ATG4D-211ENST00000589753 TMEM63CQ9P1W3 806 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 BRCA2P51587 3418 aa16.79■□□□□ 0.28
ATG4D-211ENST00000589753 THPOP40225 353 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 PEX3P56589 373 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 TMEM62Q0P6H9 643 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 FAAP100Q0VG06 881 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 DMP1Q13316 513 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-211ENST00000589753 TFDP1Q14186 410 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
ATG4D-211ENST00000589753 KMT5BQ4FZB7 885 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 SFR1Q86XK3 245 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 SPATA20Q8TB22 786 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 GSDMAQ96QA5 445 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 RMND1Q9NWS8 449 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms