RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-215ENST00000585741 DPYDQ12882 1025 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 NBPF20Q3BBV1 942 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 C1orf53Q5VUE5 145 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 CCSAPQ6IQ19 270 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-215ENST00000585741 TRAPPC12Q8WVT3 735 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 KIFAP3Q92845 792 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 ERCC4Q92889 916 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-215ENST00000585741 LBHD1Q9BQE6 289 aaPredicted RBP18.74■□□□□ 0.59
HMG20B-215ENST00000585741 REEP2Q9BRK0 252 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 SETD4Q9NVD3 440 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 KIAA1468Q9P260 1216 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 ATP11BQ9Y2G3 1177 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 PCDHA5Q9Y5H7 936 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 COL4A3BPQ9Y5P4 624 aa18.74■□□□□ 0.59
HMG20B-215ENST00000585741 A0A0U1RQG5 324 aaPredicted RBP18.73■□□□□ 0.59
HMG20B-215ENST00000585741 PVALEFA0A1B0GWK0 134 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 HIP1RO75146 1068 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 MAFO75444 373 aaPredicted RBP18.73■□□□□ 0.59
HMG20B-215ENST00000585741 GAP43P17677 238 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 KLRC1P26715 233 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 GIT2Q14161 759 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 TARBP2Q15633 366 aaKnown RBP18.73■□□□□ 0.59
HMG20B-215ENST00000585741 TRIM60Q495X7 471 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 C9orf50Q5SZB4 431 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 UNC13DQ70J99 1090 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 MYCT1Q8N699 235 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 IFT74Q96LB3 600 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 GSDMAQ96QA5 445 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
HMG20B-215ENST00000585741 LARSQ9P2J5 1176 aaKnown RBP18.73■□□□□ 0.59
HMG20B-215ENST00000585741 HDAC6Q9UBN7 1215 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 TUBE1Q9UJT0 475 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 PHF24Q9UPV7 400 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 NOD1Q9Y239 953 aa18.73■□□□□ 0.59
HMG20B-215ENST00000585741 LOXHD1Q8IVV2 1947 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 A0A1W2PQ45 241 aaPredicted RBP18.72■□□□□ 0.59
HMG20B-215ENST00000585741 A0A1W2PQY0 241 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 SHHQ15465 462 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 ARSHQ5FYA8 562 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 HERC4Q5GLZ8 1057 aaPredicted RBP18.72■□□□□ 0.59
HMG20B-215ENST00000585741 EFCAB12Q6NXP0 572 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 CNNM4Q6P4Q7 775 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 MTHFD1LQ6UB35 978 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
HMG20B-215ENST00000585741 DHX33Q9H6R0 707 aaKnown RBP18.72■□□□□ 0.59
HMG20B-215ENST00000585741 PARVGQ9HBI0 331 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 PDLIM7Q9NR12 457 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 KCNG1Q9UIX4 513 aa18.72■□□□□ 0.59
HMG20B-215ENST00000585741 SYCE3A1L190 88 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 BIN1O00499 593 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 SMTNP53814 917 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 PTPN11Q06124 597 aaPredicted RBP18.71■□□□□ 0.59
HMG20B-215ENST00000585741 ZSCAN23Q3MJ62 389 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 KMT5BQ4FZB7 885 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 IER5Q5VY09 327 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 LMBR1Q8WVP7 490 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 BADQ92934 168 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 DNAJC19Q96DA6 116 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 SEZ6LQ9BYH1 1024 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 POLR3FQ9H1D9 316 aaPredicted RBP18.71■□□□□ 0.59
HMG20B-215ENST00000585741 AKT3Q9Y243 479 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 EYSQ5T1H1 3165 aa18.71■□□□□ 0.59
HMG20B-215ENST00000585741 C22orf31O95567 290 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 CYP2C9P11712 490 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 ITGB8P26012 769 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 COASYQ13057 564 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 DMP1Q13316 513 aaPredicted RBP18.7■□□□□ 0.58
HMG20B-215ENST00000585741 KCNB1Q14721 858 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 PPP2R5AQ15172 486 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 LRRC71Q8N4P6 559 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 TRIML1Q8N9V2 468 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 PPP1R13LQ8WUF5 828 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 PSPC1Q8WXF1 523 aaKnown RBP18.7■□□□□ 0.58
HMG20B-215ENST00000585741 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 FAM161BQ96MY7 647 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 POLD4Q9HCU8 107 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 SEL1LQ9UBV2 794 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 GTF2IRD1Q9UHL9 959 aa18.7■□□□□ 0.58
HMG20B-215ENST00000585741 CDH23Q9H251 3354 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 CCDC169A6NNP5 214 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 SFI1A8K8P3 1242 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 ZBTB42B2RXF5 422 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 KIF20AO95235 890 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 CCDC192P0DO97 292 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 PLS3P13797 630 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 PSMD2Q13200 908 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 STIM1Q13586 685 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 TFDP1Q14186 410 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
HMG20B-215ENST00000585741 ISM2Q6H9L7 571 aa18.69■□□□□ 0.58
HMG20B-215ENST00000585741 RSPH3Q86UC2 560 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms