RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 FGGP02679 453 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 PON1P27169 355 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 HNRNPH2P55795 449 aaKnown RBP12.27□□□□□ -0.45
TOP3A-217ENST00000584582 STRN3Q13033 797 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-217ENST00000584582 SLC18A3Q16572 532 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 TRIM59Q8IWR1 403 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 SH2D3CQ8N5H7 860 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 TMEM143Q96AN5 459 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 KCNMB3Q9NPA1 279 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 P4HBP07237 508 aaKnown RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 ADCY1Q08828 1119 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 TRIP13Q15645 432 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 TRAPPC11Q7Z392 1133 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 ZNF571Q7Z3V5 609 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 DEPTORQ8TB45 409 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 AMACRQ9UHK6 382 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 PDXKO00764 312 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 CD58P19256 250 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 CARSP49589 748 aaKnown RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 BEND6Q5SZJ8 279 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 CAPN12Q6ZSI9 719 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 ACCSQ96QU6 501 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 INTS2Q9H0H0 1204 aaKnown RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 MYH6P13533 1939 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 IRS2Q9Y4H2 1338 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 ACOT2P49753 483 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 GALCP54803 685 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 HDLBPQ00341 1268 aaKnown RBP12.26□□□□□ -0.45
TOP3A-217ENST00000584582 PPP1R7Q15435 360 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 SELENOSQ9BQE4 189 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 STIM2Q9P246 746 aa12.26□□□□□ -0.45
TOP3A-217ENST00000584582 CYP26A1O43174 497 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 MYBL2P10244 700 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 CD19P15391 556 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 FMO5P49326 533 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 EPHA7Q15375 998 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 WDR44Q5JSH3 913 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 DCAF15Q66K64 600 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 MCTP2Q6DN12 878 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 AGPAT3Q9NRZ7 376 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 TOPORSQ9NS56 1045 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-217ENST00000584582 KRT14P02533 472 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 FERP16591 822 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 ITGB5P18084 799 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 PAK2Q13177 524 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 OTUD6AQ7L8S5 288 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 XXYLT1Q8NBI6 393 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 KAT5Q92993 513 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 CELF4Q9BZC1 486 aaKnown RBP12.25□□□□□ -0.45
TOP3A-217ENST00000584582 PPANQ9NQ55 473 aaKnown RBP12.25□□□□□ -0.45
TOP3A-217ENST00000584582 RASSF10A6NK89 507 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 ATP9AO75110 1047 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 FTLP02792 175 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-217ENST00000584582 CTNNA2P26232 953 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 TMOD1P28289 359 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 VAMP7P51809 220 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 PLTPP55058 493 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 SCARA5Q6ZMJ2 495 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 GSTA5Q7RTV2 222 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 CBWD2Q8IUF1 395 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 DYDC1Q8WWB3 177 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 ZNF653Q96CK0 615 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 BTBD6Q96KE9 485 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 ATP8A1Q9Y2Q0 1164 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 MYO3BQ8WXR4 1341 aa12.25□□□□□ -0.45
TOP3A-217ENST00000584582 PDE4DIPQ5VU43 2346 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 FOXN3O00409 490 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-217ENST00000584582 OPA1O60313 960 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 NR3C2P08235 984 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 CTNNA1P35221 906 aaKnown RBP12.24□□□□□ -0.45
TOP3A-217ENST00000584582 SLCO1A2P46721 670 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 DLG4P78352 724 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 KAZNQ674X7 775 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 RPUSD2Q8IZ73 545 aaKnown RBP12.24□□□□□ -0.45
TOP3A-217ENST00000584582 OR2W6PQ8NHA6 318 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 MKL1Q969V6 931 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 IQCDQ96DY2 449 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 FAM118BQ9BPY3 351 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 IMPG2Q9BZV3 1241 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 ZBTB22O15209 634 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 BUB1BO60566 1050 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-217ENST00000584582 VCAM1P19320 739 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 GNGT1P63211 74 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 KRT71Q3SY84 523 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 CBWD6Q4V339 395 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 CBWD3Q5JTY5 395 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms