RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, human

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-225	ENST00000584155	MAMDC4	Q6UXC1	1216 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	CCDC129	Q6ZRS4	1044 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	RIOX2	Q8IUF8	465 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	SHCBP1	Q8NEM2	672 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	VPS37A	Q8NEZ2	397 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	RHPN1	Q8TCX5	695 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	E2F7	Q96AV8	911 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	LRRC27	Q9C0I9	530 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	MROH8	Q9H579	483 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	C11orf16	Q9NQ32	467 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	CHST12	Q9NRB3	414 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	CLIP2	Q9UDT6	1046 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	ODF2L	Q9ULJ1	636 aa		4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	ISY1	Q9ULR0	285 aa	Known RBP	4.19	□□□□□ -1.74
NUP85-225	ENST00000584155	REV3L	O60673	3130 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	DYTN	A2CJ06	578 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	FAM86C2P	A6NEL3	165 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	GSG1L2	A8MUP6	293 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	DCDC2C	A8MYV0	355 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ALG1L2	C9J202	215 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155		F5H6K3	240 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ARVCF	O00192	962 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	DYNC1LI2	O43237	492 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	SLC26A4	O43511	780 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	LILRB5	O75023	590 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	PRDM1	O75626	825 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	MBD4	O95243	580 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	FGB	P02675	491 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	RPN1	P04843	607 aa	Known RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	C6orf222	P0C671	652 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	RARB	P10826	455 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	CYP2C9	P11712	490 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	FST	P19883	344 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	PML	P29590	882 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ADD2	P35612	726 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ICA1	Q05084	483 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	KLRC3	Q07444	240 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	TTLL4	Q14679	1199 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	TTF1	Q15361	905 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	MUM1L1	Q5H9M0	696 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	LCE5A	Q5TCM9	118 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	TSHZ3	Q63HK5	1081 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	CXCL17	Q6UXB2	119 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	EEPD1	Q7L9B9	569 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	TMC7	Q7Z402	723 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	RNF180	Q86T96	592 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	EGFL6	Q8IUX8	553 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	FAM126B	Q8IXS8	530 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	RAVER1	Q8IY67	606 aa	Known RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	CCDC144CP	Q8IYA2	1237 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ABRA	Q8N0Z2	381 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	WFDC12	Q8WWY7	111 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	HERVK_113	Q902F9	699 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	GOLGA1	Q92805	767 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	MEGF10	Q96KG7	1140 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	TOX2	Q96NM4	488 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	SLC30A3	Q99726	388 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	LRFN3	Q9BTN0	628 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	OSBPL7	Q9BZF2	842 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	WNT8A	Q9H1J5	351 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	PPCS	Q9HAB8	311 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	STARD7	Q9NQZ5	370 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ZDHHC3	Q9NYG2	299 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	CLIC5	Q9NZA1	410 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	FAM184B	Q9ULE4	1060 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	PPP1R9A	Q9ULJ8	1098 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	GTF2A1L	Q9UNN4	478 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	MYH1	P12882	1939 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	FRMPD3	Q5JV73	1810 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	ZNF536	O15090	1300 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	PLXNA1	Q9UIW2	1896 aa		4.18	□□□□□ -1.74
NUP85-225	ENST00000584155	MAST2	Q6P0Q8	1798 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	IGKV6D-41	A0A0C4DH26	115 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155		A0A1W2PRQ8	180 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	KRTAP9-7	A8MTY7	169 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	MINDY4B	A8MYZ0	360 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	PRRT4	C9JH25	899 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	PIK3CD	O00329	1044 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	IPO8	O15397	1037 aa	Known RBP	4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	B4GALT4	O60513	344 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	LPXN	O60711	386 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	DUSP11	O75319	330 aa	Known RBP	4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	MTA2	O94776	668 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	SLC25A27	O95847	323 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	NDUFB10	O96000	172 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	RBP3	P10745	1247 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	AKR1A1	P14550	325 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	NOS3	P29474	1203 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	ANP32A	P39687	249 aa	Known RBP	4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	GJA9	P57773	515 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	RAC1	P63000	192 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	RACK1	P63244	317 aa	Known RBP	4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	MRPS5	P82675	430 aa	Known RBP	4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	DPYD	Q12882	1025 aa		4.17	□□□□□ -1.74
NUP85-225	ENST00000584155	HYI	Q5T013	277 aa		4.17	□□□□□ -1.74

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