RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TIPINQ9BVW5 301 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 TRPV6Q9H1D0 765 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 POLR3FQ9H1D9 316 aaPredicted RBP10.57□□□□□ -0.72
RFFL-210ENST00000582308 PANK4Q9NVE7 773 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 KIAA1468Q9P260 1216 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 ODF2LQ9ULJ1 636 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 PCDHA2Q9Y5H9 948 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 MKI67P46013 3256 aaKnown RBP10.57□□□□□ -0.72
RFFL-210ENST00000582308 SIP14410 1827 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 GAS2O43903 313 aaKnown RBP10.56□□□□□ -0.72
RFFL-210ENST00000582308 FAM13AO94988 1023 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 SMC2O95347 1197 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 CYP2C9P11712 490 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 EHHADHQ08426 723 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 COASYQ13057 564 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 PTGISQ16647 500 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 KMT5BQ4FZB7 885 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 IER5Q5VY09 327 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 SLC39A5Q6ZMH5 540 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 UNC13DQ70J99 1090 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 CCDC65Q8IXS2 484 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 ASAP3Q8TDY4 903 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 PRPF31Q8WWY3 499 aaKnown RBP10.56□□□□□ -0.72
RFFL-210ENST00000582308 BSNDQ8WZ55 320 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 KIFAP3Q92845 792 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 WNT8BQ93098 351 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 HPS3Q969F9 1004 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 SMARCE1Q969G3 411 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
RFFL-210ENST00000582308 GSDMAQ96QA5 445 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 ZHX3Q9H4I2 956 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
RFFL-210ENST00000582308 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
RFFL-210ENST00000582308 MAN1B1Q9UKM7 699 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 COL4A3BPQ9Y5P4 624 aa10.56□□□□□ -0.72
RFFL-210ENST00000582308 SMIM35A0A1B0GVV1 85 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 BIN1O00499 593 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 B4GALT4O60513 344 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 TBCAO75347 108 aaKnown RBP10.55□□□□□ -0.72
RFFL-210ENST00000582308 VTNP04004 478 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 PLS3P13797 630 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 GAP43P17677 238 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 GLRA2P23416 452 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 DNM2P50570 870 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
RFFL-210ENST00000582308 RTP1P59025 263 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 LAMTOR4Q0VGL1 99 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 KCNB1Q14721 858 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 SNX17Q15036 470 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 HERC4Q5GLZ8 1057 aaPredicted RBP10.55□□□□□ -0.72
RFFL-210ENST00000582308 ISM2Q6H9L7 571 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 NECAB2Q7Z6G3 386 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 UBE2Q1Q7Z7E8 422 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 SFR1Q86XK3 245 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 KSR1Q8IVT5 923 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 MYCT1Q8N699 235 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 DNAJB3Q8WWF6 145 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 TCP11Q8WWU5 503 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 PSPC1Q8WXF1 523 aaKnown RBP10.55□□□□□ -0.72
RFFL-210ENST00000582308 ABHD8Q96I13 439 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 FAM49AQ9H0Q0 323 aaPredicted RBP10.55□□□□□ -0.72
RFFL-210ENST00000582308 C11orf49Q9H6J7 331 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 PARVGQ9HBI0 331 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 TBC1D7Q9P0N9 293 aa10.55□□□□□ -0.72
RFFL-210ENST00000582308 RHOBTB3O94955 611 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 CD4P01730 458 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 BMP6P22004 513 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 TMOD1P28289 359 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 NPTX2P47972 431 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 PEX3P56589 373 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 MORC3Q14149 939 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 MXD4Q14582 209 aaPredicted RBP10.54□□□□□ -0.72
RFFL-210ENST00000582308 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
RFFL-210ENST00000582308 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 ODR4Q5SWX8 454 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 TAF2Q6P1X5 1199 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 ANKRD33Q7Z3H0 272 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 FAM126BQ8IXS8 530 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 GLIS3Q8NEA6 775 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 DHX38Q92620 1227 aaKnown RBP10.54□□□□□ -0.72
RFFL-210ENST00000582308 ZNF668Q96K58 619 aaPredicted RBP10.54□□□□□ -0.72
RFFL-210ENST00000582308 FIZ1Q96SL8 496 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 NTPCRQ9BSD7 190 aaKnown RBP10.54□□□□□ -0.72
RFFL-210ENST00000582308 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
RFFL-210ENST00000582308 C17orf75Q9HAS0 396 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 EXOC1Q9NV70 894 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 SEL1LQ9UBV2 794 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 AKT3Q9Y243 479 aa10.54□□□□□ -0.72
RFFL-210ENST00000582308 SCN5AQ14524 2016 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 CCDC169A6NNP5 214 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 ASAP2O43150 1006 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 PQBP1O60828 265 aaKnown RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 GPR32O75388 356 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms