RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RCOR1Q9UKL0 485 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 CDY2AQ9Y6F7 541 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 EPOPA6NHQ4 379 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 ZBTB42B2RXF5 422 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 SPTLC2O15270 562 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 MAGEB2O15479 319 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 MED24O75448 989 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 POU3F3P20264 500 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 KLRC1P26715 233 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 YWHABP31946 246 aaKnown RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 HTRA4P83105 476 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 CYP4A11Q02928 519 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 STK38Q15208 465 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 CCDC85BQ15834 202 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 ANO5Q75V66 913 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 TPH2Q8IWU9 490 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 NME8Q8N427 588 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 SNX29Q8TEQ0 813 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 TOP1MTQ969P6 601 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 NACC1Q96RE7 527 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 CEP89Q96ST8 783 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 JPH2Q9BR39 696 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 MMTAG2Q9BU76 263 aaKnown RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 CCSER1Q9C0I3 900 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 SCAND2PQ9GZW5 306 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 RGL1Q9NZL6 768 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 WRAP73Q9P2S5 460 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
GGA3-209ENST00000580646 INSL6Q9Y581 213 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
GGA3-209ENST00000580646 IGKV6-21A0A0C4DH24 114 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 LINC01553A4QN01 128 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 M0QZ92 97 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 GAS2O43903 313 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 MAFO75444 373 aaPredicted RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 UPP2O95045 317 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 C22orf31O95567 290 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 CCT6AP40227 531 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 RFC5P40937 340 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 ERVK-21P61565 698 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 TMEM62Q0P6H9 643 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 FOXD4L5Q5VV16 416 aaPredicted RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 FOXD4L4Q8WXT5 416 aaPredicted RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 TGS1Q96RS0 853 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 CELF4Q9BZC1 486 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 AGO3Q9H9G7 860 aaKnown RBP11.02□□□□□ -0.65
GGA3-209ENST00000580646 CYP26B1Q9NR63 512 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 TRPV2Q9Y5S1 764 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.65
GGA3-209ENST00000580646 DDX11L8A8MPP1 907 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 ENPP3O14638 875 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 CUTAO60888 179 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 MARCKSP29966 332 aaPredicted RBP11.01□□□□□ -0.65
GGA3-209ENST00000580646 CD52P31358 61 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 TXLNAP40222 546 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 UBA7P41226 1012 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 RARRES1P49788 294 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 GRB10Q13322 594 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 FAM43BQ6ZT52 329 aaPredicted RBP11.01□□□□□ -0.65
GGA3-209ENST00000580646 TRMT1LQ7Z2T5 733 aaKnown RBP11.01□□□□□ -0.65
GGA3-209ENST00000580646 CABP7Q86V35 215 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 KIAA0319LQ8IZA0 1049 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 SP7Q8TDD2 431 aaPredicted RBP11.01□□□□□ -0.65
GGA3-209ENST00000580646 CALML4Q96GE6 196 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 CSRNP2Q9H175 543 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 DHX33Q9H6R0 707 aaKnown RBP11.01□□□□□ -0.65
GGA3-209ENST00000580646 TFIP11Q9UBB9 837 aaKnown RBP11.01□□□□□ -0.65
GGA3-209ENST00000580646 MTUS1Q9ULD2 1270 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 GBF1Q92538 1859 aa11.01□□□□□ -0.65
GGA3-209ENST00000580646 CHD7Q9P2D1 2997 aa11□□□□□ -0.65
GGA3-209ENST00000580646 PP2D1A8MPX8 630 aa11□□□□□ -0.65
GGA3-209ENST00000580646 LPXNO60711 386 aa11□□□□□ -0.65
GGA3-209ENST00000580646 DGAT1O75907 488 aa11□□□□□ -0.65
GGA3-209ENST00000580646 TMOD1P28289 359 aa11□□□□□ -0.65
GGA3-209ENST00000580646 GRIN1Q05586 938 aa11□□□□□ -0.65
GGA3-209ENST00000580646 TBC1D8BQ0IIM8 1120 aa11□□□□□ -0.65
GGA3-209ENST00000580646 MTERF2Q49AM1 385 aa11□□□□□ -0.65
GGA3-209ENST00000580646 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
GGA3-209ENST00000580646 AXDND1Q5T1B0 1012 aaPredicted RBP11□□□□□ -0.65
GGA3-209ENST00000580646 POTEGQ6S5H5 508 aa11□□□□□ -0.65
GGA3-209ENST00000580646 SLC7A3Q8WY07 619 aa11□□□□□ -0.65
GGA3-209ENST00000580646 CDK5RAP3Q96JB5 506 aa11□□□□□ -0.65
GGA3-209ENST00000580646 CEP170P1Q96L14 293 aa11□□□□□ -0.65
GGA3-209ENST00000580646 SUGCTQ9HAC7 445 aa11□□□□□ -0.65
GGA3-209ENST00000580646 DDX19AQ9NUU7 478 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms