RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 NR2E3Q9Y5X4 410 aa8.15□□□□□ -1.1
PPP4R1-216ENST00000580283 ADGRA2Q96PE1 1338 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 NRDCO43847 1150 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 SGPL1O95470 568 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 IGKV5-2P06315 115 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 CD3EP07766 207 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 NAT2P11245 290 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 PSMC4P43686 418 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 GTF2A2P52657 109 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 RTP1P59025 263 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 U2AF1L4Q8WU68 220 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 SLC12A9Q9BXP2 914 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 VEZTQ9HBM0 779 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 ERVK13-1Q9NX77 482 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 GABRQQ9UN88 632 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 GPR55Q9Y2T6 319 aaPredicted RBP8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 YBX2Q9Y2T7 364 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 TAF6LQ9Y6J9 622 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 REV3LO60673 3130 aa8.14□□□□□ -1.11
PPP4R1-216ENST00000580283 PRMT2P55345 433 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 CTSWP56202 376 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 MOGSQ13724 837 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 NCAPHQ15003 741 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 LRIT3Q3SXY7 679 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 RTP2Q5QGT7 225 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 GALNT18Q6P9A2 607 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 IRF2BP1Q8IU81 584 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 SIRT2Q8IXJ6 389 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 FBXO15Q8NCQ5 510 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 INTS4Q96HW7 963 aaKnown RBP8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 TMEM39BQ9GZU3 492 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 TDRD3Q9H7E2 651 aaKnown RBP8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 CWC25Q9NXE8 425 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 ZNF70Q9UC06 446 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 CPA4Q9UI42 421 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 JAG2Q9Y219 1238 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 TTC28Q96AY4 2481 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 PTPRFP10586 1907 aa8.13□□□□□ -1.11
PPP4R1-216ENST00000580283 AK9Q5TCS8 1911 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 ANKRD34BA5PLL1 514 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 FADS2P1A8MWK0 482 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 C8AP07357 584 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 HOXB7P09629 217 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 FGRP09769 529 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 IL1R1P14778 569 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 GALK1P51570 392 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 NLRX1Q86UT6 975 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 SLC43A3Q8NBI5 491 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 DIS3LQ8TF46 1054 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 ZKSCAN4Q969J2 545 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 GUCD1Q96NT3 240 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 CDC5LQ99459 802 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 APBA2Q99767 749 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 IGSF5Q9NSI5 407 aa8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 R3HCC1Q9Y3T6 440 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-216ENST00000580283 PLXNB2O15031 1838 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 A0A1W2PQ45 241 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 A0A1W2PQY0 241 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 TAF5LO75529 589 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 ETFBP38117 255 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 PRKCZQ05513 592 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 CHRNDQ07001 517 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 MESP2Q0VG99 397 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 KIF22Q14807 665 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 HSF5Q4G112 596 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 C15orf52Q6ZUT6 534 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 JAMLQ86YT9 394 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 RAET1EQ8TD07 263 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 PAWRQ96IZ0 340 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 ZCCHC17Q9NP64 241 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 LAS1LQ9Y4W2 734 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-216ENST00000580283 PHIPQ8WWQ0 1821 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 MYPNQ86TC9 1320 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 MAPK8IP3Q9UPT6 1336 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 A0A1W2PQ27 194 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 A0A1W2PQ64 194 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 A0A1W2PQC6 194 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 A0A1W2PQD8 194 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 NOTOA8MTQ0 251 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 TCP10L2B9ZVM9 353 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 CSF1RP07333 972 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 CETPP11597 493 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 HSP90B1P14625 803 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 FKBP1AP62942 108 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 CYP2R1Q6VVX0 501 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 SYDE1Q6ZW31 735 aaPredicted RBP8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 MCF2L2Q86YR7 1114 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 CRACR2BQ8N4Y2 399 aaPredicted RBP8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 PPP1R14AQ96A00 147 aa8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 RCC1LQ96I51 464 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 FCRL3Q96P31 734 aaPredicted RBP8.1□□□□□ -1.11
PPP4R1-216ENST00000580283 CGGBP1Q9UFW8 167 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms