RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NR2E1Q9Y466 385 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 NRXN2Q9P2S2 1712 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF233A6NK53 670 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 IPO5O00410 1097 aaKnown RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 NFIBO00712 420 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ITGB5P18084 799 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 PDCLQ13371 301 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 LLGL1Q15334 1064 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 BTNL9Q6UXG8 535 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF720Q7Z2F6 126 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 PEX26Q7Z412 305 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 LDHDQ86WU2 507 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 LRRC57Q8N9N7 239 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 BORCS6Q96GS4 357 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 WDR11Q9BZH6 1224 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 AGPAT3Q9NRZ7 376 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 TMOD2Q9NZR1 351 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 COL20A1Q9P218 1284 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF70Q9UC06 446 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 AMACRQ9UHK6 382 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ZEB2O60315 1214 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 EXOC3O60645 756 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 HIP1RO75146 1068 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 FLOT1O75955 427 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 H2AFZP0C0S5 128 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 INPP5BP32019 993 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 PSMC2P35998 433 aaKnown RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 USP8P40818 1118 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 FMO5P49326 533 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 PRELPP51888 382 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 SATB1Q01826 763 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 H2AFVQ71UI9 128 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 TMX2Q9Y320 296 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 SH3BP1Q9Y3L3 701 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ENTPD3O75355 529 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 CYP3A4P08684 503 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 FLT3P36888 993 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 CCT5P48643 541 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 IRAK1P51617 712 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 JAM2P57087 298 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 GNGT1P63211 74 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 NBPF20Q3BBV1 942 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 ICE2Q659A1 982 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 AADACL2Q6P093 401 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 EMBQ6PCB8 327 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 DAW1Q8N136 415 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 ARHGEF26Q96DR7 871 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 NEUROG2Q9H2A3 272 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 GPRC5CQ9NQ84 441 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 GDF3Q9NR23 364 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 OLFML3Q9NRN5 406 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 CWC15Q9P013 229 aaKnown RBP11.41□□□□□ -0.58
TOP3A-209ENST00000580095 NOC2LQ9Y3T9 749 aaKnown RBP11.41□□□□□ -0.58
TOP3A-209ENST00000580095 GREB1LQ9C091 1923 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-209ENST00000580095 ARHGEF35A5YM69 484 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 GOLGA8JA6NMD2 632 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 F8VZ95 297 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 KRIT1O00522 736 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 SORBS3O60504 671 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 BUB1BO60566 1050 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-209ENST00000580095 STAT1P42224 750 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 NNTQ13423 1086 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-209ENST00000580095 BMT2Q1RMZ1 405 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 CFAP58Q5T655 872 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 HS2ST1Q7LGA3 356 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 MAATS1Q7Z4T9 603 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 SRLQ86TD4 932 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 SLC20A1Q8WUM9 679 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 KAT5Q92993 513 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 MRIQ9BWK5 157 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 METTL14Q9HCE5 456 aaKnown RBP11.41□□□□□ -0.58
TOP3A-209ENST00000580095 PPP1R9AQ9ULJ8 1098 aa11.41□□□□□ -0.58
TOP3A-209ENST00000580095 TMEM110-MUSTN1A8MSY1 372 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 K7ENM7 598 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 PIK3CDO00329 1044 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 FOXN3O00409 490 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-209ENST00000580095 SART1O43290 800 aaKnown RBP11.4□□□□□ -0.58
TOP3A-209ENST00000580095 GCLMP48507 274 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 PHLDB3Q6NSJ2 640 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 SLC35G2Q8TBE7 412 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 PIK3R5Q8WYR1 880 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 PLCD4Q9BRC7 762 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 CBWD1Q9BRT8 395 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 INTS2Q9H0H0 1204 aaKnown RBP11.4□□□□□ -0.58
TOP3A-209ENST00000580095 DPH5Q9H2P9 285 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms