RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 DHX58Q96C10 678 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 SCLYQ96I15 445 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 WNT8AQ9H1J5 351 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 CUEDC2Q9H467 287 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 XPNPEP1Q9NQW7 623 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 WDR81Q562E7 1941 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 GPR32O75388 356 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 PFKFB1P16118 471 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 ARL2P36404 184 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 FPGSQ05932 587 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 TRAF7Q6Q0C0 670 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 CLEC17AQ6ZS10 378 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 KIFAP3Q92845 792 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 USP25Q9UHP3 1055 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 GINS2Q9Y248 185 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 SQORQ9Y6N5 450 aa17.27■□□□□ 0.36
SLC6A4-205ENST00000579221 ALPK3Q96L96 1907 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 CSF2RAP15509 400 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 GUCY2CP25092 1073 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 SYKP43405 635 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 GPC3P51654 580 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 AMPD3Q01432 767 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 LAMTOR4Q0VGL1 99 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 TFDP1Q14186 410 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 KIZQ2M2Z5 673 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 NAALADL2Q58DX5 795 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 ZNF410Q86VK4 478 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 NLRP7Q8WX94 980 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 SCLT1Q96NL6 688 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 PPP1R16BQ96T49 567 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 RUSC1Q9BVN2 902 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 POLR3FQ9H1D9 316 aaPredicted RBP17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 ADAMTS10Q9H324 1103 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 HPSEQ9Y251 543 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 COL4A3BPQ9Y5P4 624 aa17.26■□□□□ 0.35
SLC6A4-205ENST00000579221 KRT18P05783 430 aaKnown RBP17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 PFKMP08237 780 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 SRGAP2CP0DJJ0 459 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 NDUFA8P51970 172 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 E2F4Q16254 413 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 ARSHQ5FYA8 562 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 DEFB128Q7Z7B8 93 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 CEP57L1Q8IYX8 460 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 TMEM87AQ8NBN3 555 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 IFT74Q96LB3 600 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 GCOM2Q9BZD3 368 aaPredicted RBP17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 INO80BQ9C086 356 aaPredicted RBP17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 MAGEF1Q9HAY2 307 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 CDHR5Q9HBB8 845 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 IL23AQ9NPF7 189 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 GPRC5CQ9NQ84 441 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
SLC6A4-205ENST00000579221 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 A0A087WZ62 844 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 NBNO60934 754 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 HIP1RO75146 1068 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 PRPF40AO75400 957 aaKnown RBP17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 CXCL10P02778 98 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 GLRA2P23416 452 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 MAGEA10P43363 369 aaPredicted RBP17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 POU5F1BQ06416 359 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 PPP2R5AQ15172 486 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 ZNF668Q96K58 619 aaPredicted RBP17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 NLRP4Q96MN2 994 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 OSMRQ99650 979 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 FDXACB1Q9BRP7 624 aaPredicted RBP17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 C17orf75Q9HAS0 396 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 ODF2LQ9ULJ1 636 aa17.24■□□□□ 0.35
SLC6A4-205ENST00000579221 NPHP3-ACAD11A0A0J9YXS1 232 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 FGBP02675 491 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 SLFN14P0C7P3 912 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 GHRP10912 638 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 EIF4BP23588 611 aaKnown RBP17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 RAD51AP2Q09MP3 1159 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 GIT2Q14161 759 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 MBTPS1Q14703 1052 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 GPNMBQ14956 572 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 TSHZ1Q6ZSZ6 1077 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 RNF149Q8NC42 400 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 SEPT8Q92599 483 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 GOLPH3LQ9H4A5 285 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 KBTBD4Q9NVX7 518 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms