RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	PRKAG2	Q9UGJ0	569 aa		12.5	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	AKT3	Q9Y243	479 aa		12.5	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	GRIN2D	O15399	1336 aa		12.5	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SI	P14410	1827 aa		12.5	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CUL9	Q8IWT3	2517 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PHLPP2	Q6ZVD8	1323 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	IGKV6-21	A0A0C4DH24	114 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	GTPBP6	O43824	516 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	NR1I2	O75469	434 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	FAM13A	O94988	1023 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SMC2	O95347	1197 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	GAP43	P17677	238 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	LIG1	P18858	919 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ABCD1	P33897	745 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SMTN	P53814	917 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ASIC1	P78348	528 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ADAM17	P78536	824 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SNW1	Q13573	536 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TRIM60	Q495X7	471 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	MARCH8	Q5T0T0	291 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	C1orf186	Q6ZWK4	172 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SERINC5	Q86VE9	423 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CCDC65	Q8IXS2	484 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ENGASE	Q8NFI3	743 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SCLT1	Q96NL6	688 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TRMT13	Q9NUP7	481 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	DACT1	Q9NYF0	836 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	LARS	Q9P2J5	1176 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	COL4A3BP	Q9Y5P4	624 aa		12.49	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733		H0YCG3	227 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SOX1	O00570	391 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	B4GALT4	O60513	344 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CLTB	P09497	229 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SCP2	P22307	547 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	BMP8B	P34820	402 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	AFM	P43652	599 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TLE2	Q04725	743 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	DMP1	Q13316	513 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	POSTN	Q15063	836 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	MAEA	Q7L5Y9	396 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	DYM	Q7RTS9	669 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	RPAIN	Q86UA6	219 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	LRRC71	Q8N4P6	559 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PPP1R13L	Q8WUF5	828 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	DDX12P	Q92771	950 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PAGE5	Q96GU1	130 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CEP89	Q96ST8	783 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	C7orf25	Q9BPX7	421 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	RUSC1	Q9BVN2	902 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TRIM9	Q9C026	710 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	POLR3F	Q9H1D9	316 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ZHX3	Q9H4I2	956 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PARVG	Q9HBI0	331 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	RMND1	Q9NWS8	449 aa		12.48	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	DNAH12	Q6ZR08	3092 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	MYMK	A6NI61	221 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	HIP1R	O75146	1068 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PARN	O95453	639 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CD4	P01730	458 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	IDE	P14735	1019 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	THPO	P40225	353 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CLCN3	P51790	818 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	MRPS6	P82932	125 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ZNF200	P98182	395 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	RAD51AP2	Q09MP3	1159 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	GIT2	Q14161	759 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	LRRC26	Q2I0M4	334 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ODR4	Q5SWX8	454 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	CNNM4	Q6P4Q7	775 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	UNC13D	Q70J99	1090 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ZNF410	Q86VK4	478 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	RHPN2	Q8IUC4	686 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ZBTB8OS	Q8IWT0	167 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	DNAJB3	Q8WWF6	145 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	NLRP7	Q8WX94	980 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TMEM143	Q96AN5	459 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	LRCH3	Q96II8	777 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	REEP2	Q9BRK0	252 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	GTPBP4	Q9BZE4	634 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	INO80B	Q9C086	356 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TRPV6	Q9H1D0	765 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	NUP62CL	Q9H1M0	184 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	C2orf40	Q9H1Z8	148 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	XPNPEP1	Q9NQW7	623 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PDLIM7	Q9NR12	457 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	TMEM39A	Q9NV64	488 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SEL1L	Q9UBV2	794 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	SCN5A	Q14524	2016 aa		12.47	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PVALEF	A0A1B0GWK0	134 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PITPNM1	O00562	1244 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PLS3	P13797	630 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ARL2	P36404	184 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	NAMPT	P43490	491 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	PHKA2	P46019	1235 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	ARSH	Q5FYA8	562 aa		12.46	□□□□□ -0.41
CDK5RAP3-210	ENST00000578733	RUFY4	Q6ZNE9	571 aa		12.46	□□□□□ -0.41

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