RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 FAM86B1E9PN63 330 aa19.9■□□□□ 0.78
CCDC40-211ENST00000574099 FOSP01100 380 aaPredicted RBP19.9■□□□□ 0.78
CCDC40-211ENST00000574099 FAM86B2P0C5J1 330 aa19.9■□□□□ 0.78
CCDC40-211ENST00000574099 ZSCAN20P17040 1043 aaPredicted RBP19.9■□□□□ 0.78
CCDC40-211ENST00000574099 MTHFRP42898 656 aa19.9■□□□□ 0.78
CCDC40-211ENST00000574099 NLRP11P59045 1033 aaKnown RBP19.9■□□□□ 0.78
CCDC40-211ENST00000574099 HELQQ8TDG4 1101 aa19.9■□□□□ 0.78
CCDC40-211ENST00000574099 LIMD1Q9UGP4 676 aa19.9■□□□□ 0.78
CCDC40-211ENST00000574099 DBR1Q9UK59 544 aaKnown RBP19.9■□□□□ 0.78
CCDC40-211ENST00000574099 DENND4AQ7Z401 1863 aa19.9■□□□□ 0.78
CCDC40-211ENST00000574099 PPP1R18Q6NYC8 613 aa19.89■□□□□ 0.77
CCDC40-211ENST00000574099 LRRC71Q8N4P6 559 aa19.89■□□□□ 0.77
CCDC40-211ENST00000574099 FLCNQ8NFG4 579 aa19.89■□□□□ 0.77
CCDC40-211ENST00000574099 FEZF2Q8TBJ5 459 aa19.89■□□□□ 0.77
CCDC40-211ENST00000574099 AUTS2Q8WXX7 1259 aa19.89■□□□□ 0.77
CCDC40-211ENST00000574099 BBXQ8WY36 941 aaPredicted RBP19.89■□□□□ 0.77
CCDC40-211ENST00000574099 NKD2Q969F2 451 aaPredicted RBP19.89■□□□□ 0.77
CCDC40-211ENST00000574099 WDR81Q562E7 1941 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-211ENST00000574099 SMCO2A6NFE2 343 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 IPO5O00410 1097 aaKnown RBP19.88■□□□□ 0.77
CCDC40-211ENST00000574099 DHX15O43143 795 aaKnown RBP19.88■□□□□ 0.77
CCDC40-211ENST00000574099 FGFR4P22455 802 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 AP3B2Q13367 1082 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 JAKMIP3Q5VZ66 844 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 KIAA1841Q6NSI8 718 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 NIPA1Q7RTP0 329 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 SCLT1Q96NL6 688 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 TCEAL9Q9UHQ7 104 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 DMDP11532 3685 aa19.88■□□□□ 0.77
CCDC40-211ENST00000574099 SLC27A2O14975 620 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 CXCL14O95715 111 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 EPCAMP16422 314 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 BCAR1P56945 870 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 CWF19L1Q69YN2 538 aaKnown RBP19.87■□□□□ 0.77
CCDC40-211ENST00000574099 MCTP2Q6DN12 878 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 EFCAB12Q6NXP0 572 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 ZDHHC14Q8IZN3 488 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 ADSSL1Q8N142 457 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 TMEM87AQ8NBN3 555 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 TMEM169Q96HH4 297 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 ZNF577Q9BSK1 485 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 ADAMTS10Q9H324 1103 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 GABBR1Q9UBS5 961 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 MAFBQ9Y5Q3 323 aaPredicted RBP19.87■□□□□ 0.77
CCDC40-211ENST00000574099 FAM186AA6NE01 2351 aa19.87■□□□□ 0.77
CCDC40-211ENST00000574099 DCHS1Q96JQ0 3298 aa19.86■□□□□ 0.77
CCDC40-211ENST00000574099 IGLV3-22A0A075B6J6 115 aa19.86■□□□□ 0.77
CCDC40-211ENST00000574099 EIF4BP23588 611 aaKnown RBP19.86■□□□□ 0.77
CCDC40-211ENST00000574099 CLK2P49760 499 aaKnown RBP19.86■□□□□ 0.77
CCDC40-211ENST00000574099 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
CCDC40-211ENST00000574099 TMEM173Q86WV6 379 aaPredicted RBP19.86■□□□□ 0.77
CCDC40-211ENST00000574099 VPS52Q8N1B4 723 aa19.86■□□□□ 0.77
CCDC40-211ENST00000574099 CEP131Q9UPN4 1083 aa19.86■□□□□ 0.77
CCDC40-211ENST00000574099 V9GY48 417 aaPredicted RBP19.86■□□□□ 0.77
CCDC40-211ENST00000574099 RIF1Q5UIP0 2472 aaKnown RBP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 ZC3H11AO75152 810 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 ALDH7A1P49419 539 aaKnown RBP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 CLCN5P51795 746 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 BMS1Q14692 1282 aaKnown RBP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 RTN1Q16799 776 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 ATAT1Q5SQI0 421 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 APOA5Q6Q788 366 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 TMC5Q6UXY8 1006 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 SGMS1Q86VZ5 419 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 MRPL9Q9BYD2 267 aaKnown RBP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 LSG1Q9H089 658 aaKnown RBP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 ZBP1Q9H171 429 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 DZANK1Q9NVP4 752 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 RBM28Q9NW13 759 aaKnown RBP19.85■□□□□ 0.77
CCDC40-211ENST00000574099 BARHL2Q9NY43 387 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 SAMM50Q9Y512 469 aa19.85■□□□□ 0.77
CCDC40-211ENST00000574099 MAGEB2O15479 319 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 CSDE1O75534 798 aaKnown RBP19.84■□□□□ 0.77
CCDC40-211ENST00000574099 EOMESO95936 686 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 PSAPP07602 524 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 TMOD1P28289 359 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 ID4P47928 161 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 GPC3P51654 580 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 LONRF3Q496Y0 759 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 CREB3L3Q68CJ9 461 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 ZNF746Q6NUN9 644 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-211ENST00000574099 ZNF598Q86UK7 904 aaKnown RBP19.84■□□□□ 0.77
CCDC40-211ENST00000574099 PLCD3Q8N3E9 789 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 LINC01465Q8N7H1 131 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 TCEANC2Q96MN5 208 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 C2orf16Q68DN1 1984 aa19.84■□□□□ 0.77
CCDC40-211ENST00000574099 A0A0U1RQF3 1178 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 SPDYE4A6NLX3 237 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 ADAMTS3O15072 1205 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 PI15O43692 258 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 DARSP14868 501 aaKnown RBP19.83■□□□□ 0.77
CCDC40-211ENST00000574099 FUT2Q10981 343 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 CABP7Q86V35 215 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 SMAP1Q8IYB5 467 aaPredicted RBP19.83■□□□□ 0.77
CCDC40-211ENST00000574099 NLRP7Q8WX94 980 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 CYP26B1Q9NR63 512 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 TBC1D22BQ9NU19 505 aa19.83■□□□□ 0.77
CCDC40-211ENST00000574099 USTQ9Y2C2 406 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms