RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CEP290O15078 2479 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 SIP14410 1827 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 LTBP2Q14767 1821 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 ASAP2O43150 1006 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 NLRP11P59045 1033 aaKnown RBP16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 CDC42EP1Q00587 391 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 AMPD3Q01432 767 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 RBL2Q08999 1139 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 RAD51AP2Q09MP3 1159 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 DRP2Q13474 957 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 NAALADL2Q58DX5 795 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 ZNF710Q8N1W2 664 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 LINC01465Q8N7H1 131 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 TMEM87AQ8NBN3 555 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 CCDC34Q96HJ3 373 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 RUSC1Q9BVN2 902 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 CELF4Q9BZC1 486 aaKnown RBP16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 POLR3FQ9H1D9 316 aaPredicted RBP16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 XPNPEP1Q9NQW7 623 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 USP25Q9UHP3 1055 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 UMODL1Q5DID0 1318 aa16.1■□□□□ 0.17
NPLOC4-209ENST00000572760 PARNO95453 639 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 IQCF3P0C7M6 154 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 NDUFA8P51970 172 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 TFDP1Q14186 410 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 MFSD5Q6N075 450 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 C1orf186Q6ZWK4 172 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 LRRC15Q8TF66 581 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 NLRP7Q8WX94 980 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 KIFAP3Q92845 792 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 BADQ92934 168 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 SCLYQ96I15 445 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 ZNF668Q96K58 619 aaPredicted RBP16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 IFT74Q96LB3 600 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 GPRC5CQ9NQ84 441 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 HPSEQ9Y251 543 aa16.09■□□□□ 0.17
NPLOC4-209ENST00000572760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 HIP1RO75146 1068 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 CHRNA1P02708 482 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 SRGAP2CP0DJJ0 459 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 GUCY2CP25092 1073 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 ARL2P36404 184 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 GPC3P51654 580 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 UBE2HP62256 183 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 PPP2R5AQ15172 486 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 E2F4Q16254 413 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 KIZQ2M2Z5 673 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 FAM26DQ5JW98 314 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 DYMQ7RTS9 669 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 STAMQ92783 540 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 DRC1Q96MC2 740 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 WNT8AQ9H1J5 351 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 DNAH12Q6ZR08 3092 aa16.08■□□□□ 0.16
NPLOC4-209ENST00000572760 NPHP3-ACAD11A0A0J9YXS1 232 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 FAM13AO94988 1023 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 ZNF202O95125 648 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 SLFN14P0C7P3 912 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 ITGB8P26012 769 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 RFC2P35250 354 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 AFMP43652 599 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 CRYBB1P53674 252 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 PPIGQ13427 754 aaKnown RBP eCLIP16.07■□□□□ 0.168e-16■■□□□ 13.3
NPLOC4-209ENST00000572760 DEFB128Q7Z7B8 93 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 ZNF410Q86VK4 478 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 KSR1Q8IVT5 923 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 RPUSD2Q8IZ73 545 aaKnown RBP16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 RNF149Q8NC42 400 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 CNNM3Q8NE01 707 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 OSMRQ99650 979 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 GCOM2Q9BZD3 368 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 KCNG1Q9UIX4 513 aa16.07■□□□□ 0.16
NPLOC4-209ENST00000572760 A0A087WZ62 844 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 MYMKA6NI61 221 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 LRRIQ4A6NIV6 560 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 IDEP14735 1019 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 CSF2RAP15509 400 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 GLRA2P23416 452 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 FPGSQ05932 587 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
NPLOC4-209ENST00000572760 MGAT3Q09327 533 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms