RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ANO5Q75V66 913 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 LOXHD1Q8IVV2 1947 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 FAM177A1Q8N128 213 aaPredicted RBP20.4■□□□□ 0.86
CHD3-214ENST00000572579 GJD3Q8N144 294 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 RDM1Q8NG50 284 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 CASD1Q96PB1 797 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 NLRC5Q86WI3 1866 aa20.39■□□□□ 0.86
CHD3-214ENST00000572579 STK36Q9NRP7 1315 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 CLUL1Q15846 466 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 MTERF2Q49AM1 385 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 XKR3Q5GH77 459 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.85
CHD3-214ENST00000572579 FAM43BQ6ZT52 329 aaPredicted RBP20.39■□□□□ 0.85
CHD3-214ENST00000572579 KRT25Q7Z3Z0 450 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 TNFRSF25Q93038 417 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 ELAC1Q9H777 363 aaKnown RBP20.39■□□□□ 0.85
CHD3-214ENST00000572579 TMEM161AQ9NX61 479 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 CLEC1BQ9P126 229 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 ATG2AQ2TAZ0 1938 aa20.39■□□□□ 0.85
CHD3-214ENST00000572579 PI4K2BG5E9Z4 385 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 NEFLP07196 543 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 ATF7P17544 494 aaPredicted RBP20.38■□□□□ 0.85
CHD3-214ENST00000572579 TMOD1P28289 359 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 ANAPC15P60006 121 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 ERVFC1P60507 584 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 TBC1D8BQ0IIM8 1120 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 PIK3AP1Q6ZUJ8 805 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 ZNF598Q86UK7 904 aaKnown RBP20.38■□□□□ 0.85
CHD3-214ENST00000572579 ECHDC2Q86YB7 292 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 MAP7D2Q96T17 732 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 LRFN3Q9BTN0 628 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 ATP6V0A4Q9HBG4 840 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 SEPT9Q9UHD8 586 aaPredicted RBP20.38■□□□□ 0.85
CHD3-214ENST00000572579 RALGAPA2Q2PPJ7 1873 aa20.38■□□□□ 0.85
CHD3-214ENST00000572579 DDX11L8A8MPP1 907 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 WNT7AO00755 349 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 NCK2O43639 380 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 GLP2RO95838 553 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 NPEPPSP55786 919 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 RBM10P98175 930 aaKnown RBP20.37■□□□□ 0.85
CHD3-214ENST00000572579 ZP2Q05996 745 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 NR5A1Q13285 461 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 PPP2R5CQ13362 524 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 PUS10Q3MIT2 529 aaKnown RBP20.37■□□□□ 0.85
CHD3-214ENST00000572579 CLLU1OSQ5K130 101 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 ODR4Q5SWX8 454 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 PLA2G4FQ68DD2 849 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 PPP4R3AQ6IN85 833 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 KSR1Q8IVT5 923 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 COLGALT1Q8NBJ5 622 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 MSLNLQ96KJ4 702 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 C1QTNF1Q9BXJ1 281 aa20.37■□□□□ 0.85
CHD3-214ENST00000572579 ORC3Q9UBD5 711 aaPredicted RBP20.37■□□□□ 0.85
CHD3-214ENST00000572579 FAM86C2PA6NEL3 165 aa20.36■□□□□ 0.85
CHD3-214ENST00000572579 C19orf67A6NJJ6 358 aa20.36■□□□□ 0.85
CHD3-214ENST00000572579 MAFO75444 373 aaPredicted RBP20.36■□□□□ 0.85
CHD3-214ENST00000572579 FGF18O76093 207 aa20.36■□□□□ 0.85
CHD3-214ENST00000572579 SPIRE1Q08AE8 756 aa20.36■□□□□ 0.85
CHD3-214ENST00000572579 NEK8Q86SG6 692 aa20.36■□□□□ 0.85
CHD3-214ENST00000572579 RBM23Q86U06 439 aaKnown RBP20.36■□□□□ 0.85
CHD3-214ENST00000572579 VN1R2Q8NFZ6 395 aa20.36■□□□□ 0.85
CHD3-214ENST00000572579 A0A087WZ62 844 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 CCDC194A0A1B0GVG4 234 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 FSCN2O14926 492 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 PER2O15055 1255 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 ZBTB39O15060 712 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 MBTPS2O43462 519 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 JAK2O60674 1132 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 CDKL5O76039 1030 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 PBX3P40426 434 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 NRIP1P48552 1158 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 PSMC5P62195 406 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 SMAD2Q15796 467 aaKnown RBP20.35■□□□□ 0.85
CHD3-214ENST00000572579 NLRP7Q8WX94 980 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 FAM20AQ96MK3 541 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 FDXACB1Q9BRP7 624 aaPredicted RBP20.35■□□□□ 0.85
CHD3-214ENST00000572579 TMEM117Q9H0C3 514 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 RGL1Q9NZL6 768 aa20.35■□□□□ 0.85
CHD3-214ENST00000572579 SUCLA2Q9P2R7 463 aaPredicted RBP20.35■□□□□ 0.85
CHD3-214ENST00000572579 MYH9P35579 1960 aaKnown RBP20.35■□□□□ 0.85
CHD3-214ENST00000572579 A0A0U1RQF3 1178 aa20.34■□□□□ 0.85
CHD3-214ENST00000572579 CCNT1O60563 726 aaKnown RBP20.34■□□□□ 0.85
CHD3-214ENST00000572579 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
CHD3-214ENST00000572579 ZNF710Q8N1W2 664 aa20.34■□□□□ 0.85
CHD3-214ENST00000572579 EFHBQ8N7U6 833 aa20.34■□□□□ 0.85
CHD3-214ENST00000572579 NSUN7Q8NE18 718 aaKnown RBP20.34■□□□□ 0.85
CHD3-214ENST00000572579 GTF3C6Q969F1 213 aa20.34■□□□□ 0.85
CHD3-214ENST00000572579 PCDHB12Q9Y5F1 795 aa20.34■□□□□ 0.85
CHD3-214ENST00000572579 SSTR3P32745 418 aaPredicted RBP20.33■□□□□ 0.85
CHD3-214ENST00000572579 QARSP47897 775 aaKnown RBP20.33■□□□□ 0.85
CHD3-214ENST00000572579 SPOUT1Q5T280 376 aaKnown RBP20.33■□□□□ 0.85
CHD3-214ENST00000572579 IFT122Q9HBG6 1241 aa20.33■□□□□ 0.85
CHD3-214ENST00000572579 CYP26B1Q9NR63 512 aa20.33■□□□□ 0.85
CHD3-214ENST00000572579 KIAA1671Q9BY89 1806 aa20.32■□□□□ 0.84
CHD3-214ENST00000572579 MEIS3P2A8K0S8 358 aa20.32■□□□□ 0.84
CHD3-214ENST00000572579 GPR37L1O60883 481 aa20.32■□□□□ 0.84
CHD3-214ENST00000572579 EYA4O95677 639 aa20.32■□□□□ 0.84
CHD3-214ENST00000572579 ZSCAN20P17040 1043 aaPredicted RBP20.32■□□□□ 0.84
CHD3-214ENST00000572579 ERICH6BQ5W0A0 696 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms