RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 TBKBP1A7MCY6 615 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 ADAMTS3O15072 1205 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 ZNF862O60290 1169 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 SRGAP2BP0DMP2 458 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 DARSP14868 501 aaKnown RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 GPC3P51654 580 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 TRIM29Q14134 588 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 TARBP2Q15633 366 aaKnown RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 NPY5RQ15761 445 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 PAN2Q504Q3 1202 aaKnown RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 B3GNT9Q6UX72 402 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 EP400NLQ6ZTU2 488 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 RTN4RL1Q86UN2 441 aaPredicted RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 SLC7A3Q8WY07 619 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 UIMC1Q96RL1 719 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 CDCA3Q99618 268 aaPredicted RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 MRPL9Q9BYD2 267 aaKnown RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 TMEM117Q9H0C3 514 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 CHST12Q9NRB3 414 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 ORC3Q9UBD5 711 aaPredicted RBP10.94□□□□□ -0.66
CIITA-207ENST00000571545 TPCN1Q9ULQ1 816 aa10.94□□□□□ -0.66
CIITA-207ENST00000571545 REV3LO60673 3130 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 GRM6O15303 877 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 MGEA5O60502 916 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 CCNT1O60563 726 aaKnown RBP10.93□□□□□ -0.66
CIITA-207ENST00000571545 EOMESO95936 686 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 KRT2P35908 639 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 RFC5P40937 340 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 QARSP47897 775 aaKnown RBP10.93□□□□□ -0.66
CIITA-207ENST00000571545 AK2P54819 239 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 UGCGQ16739 394 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 MTERF2Q49AM1 385 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 THNSL1Q8IYQ7 743 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 LRRC71Q8N4P6 559 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 KLHL23Q8NBE8 558 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.93□□□□□ -0.66
CIITA-207ENST00000571545 GTF3C6Q969F1 213 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 NECAB3Q96P71 396 aaPredicted RBP10.93□□□□□ -0.66
CIITA-207ENST00000571545 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
CIITA-207ENST00000571545 ADAMTS10Q9H324 1103 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 TLR9Q9NR96 1032 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 PUF60Q9UHX1 559 aaKnown RBP10.93□□□□□ -0.66
CIITA-207ENST00000571545 KCNJ14Q9UNX9 436 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 LZTS1Q9Y250 596 aa10.93□□□□□ -0.66
CIITA-207ENST00000571545 PLXNA4Q9HCM2 1894 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 IGKV6-21A0A0C4DH24 114 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 SLC37A4O43826 429 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 ITGB1P05556 798 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 P4HBP07237 508 aaKnown RBP10.92□□□□□ -0.66
CIITA-207ENST00000571545 ALADP13716 330 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 SSTR3P32745 418 aaPredicted RBP10.92□□□□□ -0.66
CIITA-207ENST00000571545 NDUFV1P49821 464 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 RAB27AP51159 221 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 FAM189BP81408 668 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 DSC3Q14574 896 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
CIITA-207ENST00000571545 PCBP1Q15365 356 aaKnown RBP eCLIP10.92□□□□□ -0.66
CIITA-207ENST00000571545 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 PIK3AP1Q6ZUJ8 805 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 OTUD6AQ7L8S5 288 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 GJD3Q8N144 294 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 SPPL3Q8TCT6 385 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 POF1BQ8WVV4 589 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 AIFM3Q96NN9 605 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 TRAIPQ9BWF2 469 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
CIITA-207ENST00000571545 KCNMB3Q9NPA1 279 aa10.92□□□□□ -0.66
CIITA-207ENST00000571545 SPTBN5Q9NRC6 3674 aaKnown RBP10.92□□□□□ -0.66
CIITA-207ENST00000571545 MYO7AQ13402 2215 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 A0A0U1RQF3 1178 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 H3BQ06 376 aaPredicted RBP10.91□□□□□ -0.66
CIITA-207ENST00000571545 EDIL3O43854 480 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 MAFO75444 373 aaPredicted RBP10.91□□□□□ -0.66
CIITA-207ENST00000571545 IBSPP21815 317 aaPredicted RBP10.91□□□□□ -0.66
CIITA-207ENST00000571545 POLGP54098 1239 aaPredicted RBP10.91□□□□□ -0.66
CIITA-207ENST00000571545 KRT17Q04695 432 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 HYAL1Q12794 435 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 SMAD4Q13485 552 aaKnown RBP10.91□□□□□ -0.66
CIITA-207ENST00000571545 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
CIITA-207ENST00000571545 ECHDC2Q86YB7 292 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 ADHFE1Q8IWW8 467 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 C4orf19Q8IY42 314 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 EFHBQ8N7U6 833 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 COLGALT1Q8NBJ5 622 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 TCP11Q8WWU5 503 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 PSPC1Q8WXF1 523 aaKnown RBP10.91□□□□□ -0.66
CIITA-207ENST00000571545 CYP26B1Q9NR63 512 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 STK39Q9UEW8 545 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 CD207Q9UJ71 328 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 ARID2Q68CP9 1835 aa10.91□□□□□ -0.66
CIITA-207ENST00000571545 ASAP2O43150 1006 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms