RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 XKR9Q5GH70 373 aa20.16■□□□□ 0.82
LITAF-204ENST00000570798 CATSPER3Q86XQ3 398 aa20.16■□□□□ 0.82
LITAF-204ENST00000570798 SLC7A3Q8WY07 619 aa20.16■□□□□ 0.82
LITAF-204ENST00000570798 ZNF689Q96CS4 500 aaPredicted RBP20.16■□□□□ 0.82
LITAF-204ENST00000570798 YME1L1Q96TA2 773 aa20.16■□□□□ 0.82
LITAF-204ENST00000570798 POLR3CQ9BUI4 534 aaPredicted RBP20.16■□□□□ 0.82
LITAF-204ENST00000570798 TUFT1Q9NNX1 390 aa20.16■□□□□ 0.82
LITAF-204ENST00000570798 RGS18Q9NS28 235 aa20.16■□□□□ 0.82
LITAF-204ENST00000570798 CDH23Q9H251 3354 aa20.15■□□□□ 0.82
LITAF-204ENST00000570798 RFXAPO00287 272 aa20.15■□□□□ 0.82
LITAF-204ENST00000570798 DGKIO75912 1065 aa20.15■□□□□ 0.82
LITAF-204ENST00000570798 POU3F3P20264 500 aaPredicted RBP20.15■□□□□ 0.82
LITAF-204ENST00000570798 POLGP54098 1239 aaPredicted RBP20.15■□□□□ 0.82
LITAF-204ENST00000570798 ZNF410Q86VK4 478 aa20.15■□□□□ 0.82
LITAF-204ENST00000570798 MAFAQ8NHW3 353 aaPredicted RBP20.15■□□□□ 0.82
LITAF-204ENST00000570798 ARNTL2Q8WYA1 636 aa20.15■□□□□ 0.82
LITAF-204ENST00000570798 TGS1Q96RS0 853 aaKnown RBP20.15■□□□□ 0.82
LITAF-204ENST00000570798 KIAA1671Q9BY89 1806 aa20.15■□□□□ 0.82
LITAF-204ENST00000570798 CHD7Q9P2D1 2997 aa20.14■□□□□ 0.82
LITAF-204ENST00000570798 A0A087WZ62 844 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 C9IYK1 514 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 LAD1O00515 517 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 GAS2O43903 313 aaKnown RBP20.14■□□□□ 0.81
LITAF-204ENST00000570798 MED24O75448 989 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 RPA1P27694 616 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 SARSP49591 514 aaKnown RBP20.14■□□□□ 0.81
LITAF-204ENST00000570798 PDIA5Q14554 519 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 RHPN2Q8IUC4 686 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 NPAS4Q8IUM7 802 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 NLRP7Q8WX94 980 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 INTS4Q96HW7 963 aaKnown RBP20.14■□□□□ 0.81
LITAF-204ENST00000570798 ADAM2Q99965 735 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 FDXACB1Q9BRP7 624 aaPredicted RBP20.14■□□□□ 0.81
LITAF-204ENST00000570798 XPNPEP1Q9NQW7 623 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 C1orf112Q9NSG2 853 aa20.14■□□□□ 0.81
LITAF-204ENST00000570798 K7ELQ4 463 aaPredicted RBP20.13■□□□□ 0.81
LITAF-204ENST00000570798 LPXNO60711 386 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 PRPHP41219 470 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 RARRES1P49788 294 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 FAM189BP81408 668 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 EMC2Q15006 297 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 SLC24A5Q71RS6 500 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 KSR1Q8IVT5 923 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 IGSF22Q8N9C0 903 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 ERMNQ8TAM6 284 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 SNX21Q969T3 373 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 TMEM143Q96AN5 459 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
LITAF-204ENST00000570798 COL4A3BPQ9Y5P4 624 aa20.13■□□□□ 0.81
LITAF-204ENST00000570798 COL6A3P12111 3177 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 ADGRA3Q8IWK6 1321 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 A0A087WWV3 80 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 DENND3A2RUS2 1198 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 DGAT1O75907 488 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 LINC00271P0C7V0 271 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 STAG3L1P0CL83 205 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 MUTP22033 750 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 IL17AQ16552 155 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 PIGOQ8TEQ8 1089 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 TCP11Q8WWU5 503 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 PRPF31Q8WWY3 499 aaKnown RBP20.12■□□□□ 0.81
LITAF-204ENST00000570798 SCLT1Q96NL6 688 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 MTRQ99707 1265 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 IFT122Q9HBG6 1241 aa20.12■□□□□ 0.81
LITAF-204ENST00000570798 DBR1Q9UK59 544 aaKnown RBP20.12■□□□□ 0.81
LITAF-204ENST00000570798 ASAP2O43150 1006 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 CSDE1O75534 798 aaKnown RBP20.11■□□□□ 0.81
LITAF-204ENST00000570798 FGFR4P22455 802 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 IGFBP4P22692 258 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 ATP2C1P98194 919 aaPredicted RBP20.11■□□□□ 0.81
LITAF-204ENST00000570798 GRB10Q13322 594 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 FERMT3Q86UX7 667 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 FIBCD1Q8N539 461 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 PSPC1Q8WXF1 523 aaKnown RBP20.11■□□□□ 0.81
LITAF-204ENST00000570798 SAMD11Q96NU1 681 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 NACC1Q96RE7 527 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 INO80BQ9C086 356 aaPredicted RBP20.11■□□□□ 0.81
LITAF-204ENST00000570798 ELAC1Q9H777 363 aaKnown RBP20.11■□□□□ 0.81
LITAF-204ENST00000570798 BMP2KQ9NSY1 1161 aaPredicted RBP20.11■□□□□ 0.81
LITAF-204ENST00000570798 LRWD1Q9UFC0 647 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 MTCH2Q9Y6C9 303 aa20.11■□□□□ 0.81
LITAF-204ENST00000570798 PDCP20941 246 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 LAMTOR4Q0VGL1 99 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 ECM1Q16610 540 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 HAUS3Q68CZ6 603 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 POTEGQ6S5H5 508 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 CMTR2Q8IYT2 770 aaKnown RBP20.1■□□□□ 0.81
LITAF-204ENST00000570798 NLRP4Q96MN2 994 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 ATP6V0A4Q9HBG4 840 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
LITAF-204ENST00000570798 MTUS1Q9ULD2 1270 aa20.1■□□□□ 0.81
LITAF-204ENST00000570798 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
LITAF-204ENST00000570798 ARL2P36404 184 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 EPC2Q52LR7 807 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 DTHD1Q6ZMT9 781 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 BRAPQ7Z569 592 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 TMEM192Q8IY95 271 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 CLP1Q92989 425 aaKnown RBP20.09■□□□□ 0.81
LITAF-204ENST00000570798 RAB34Q9BZG1 259 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms