RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 YME1L1Q96TA2 773 aa12.45□□□□□ -0.42
SMG6-206ENST00000570668 GAS2L1Q99501 681 aaPredicted RBP12.45□□□□□ -0.42
SMG6-206ENST00000570668 TUFT1Q9NNX1 390 aa12.45□□□□□ -0.42
SMG6-206ENST00000570668 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
SMG6-206ENST00000570668 ANKEF1Q9NU02 776 aa12.45□□□□□ -0.42
SMG6-206ENST00000570668 SUCLA2Q9P2R7 463 aaPredicted RBP12.45□□□□□ -0.42
SMG6-206ENST00000570668 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
SMG6-206ENST00000570668 COL4A6Q14031 1691 aa12.45□□□□□ -0.42
SMG6-206ENST00000570668 LAD1O00515 517 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 MGEA5O60502 916 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 RPA1P27694 616 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 ERVK-21P61565 698 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 PTGDRQ13258 359 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 SPRED2Q7Z698 418 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 ZNF410Q86VK4 478 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 CATSPER3Q86XQ3 398 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 MAFAQ8NHW3 353 aaPredicted RBP12.44□□□□□ -0.42
SMG6-206ENST00000570668 ERMNQ8TAM6 284 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 ARNTL2Q8WYA1 636 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
SMG6-206ENST00000570668 TGS1Q96RS0 853 aaKnown RBP12.44□□□□□ -0.42
SMG6-206ENST00000570668 ADAM2Q99965 735 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 POLR3CQ9BUI4 534 aaPredicted RBP12.44□□□□□ -0.42
SMG6-206ENST00000570668 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 RC3H2Q9HBD1 1191 aaKnown RBP12.44□□□□□ -0.42
SMG6-206ENST00000570668 RGS18Q9NS28 235 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 C1orf112Q9NSG2 853 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 UNC80Q8N2C7 3258 aa12.44□□□□□ -0.42
SMG6-206ENST00000570668 EPOPA6NHQ4 379 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 C9IYK1 514 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 K7ELQ4 463 aaPredicted RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 MED24O75448 989 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 DGKIO75912 1065 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 STAG3L1P0CL83 205 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 POU3F3P20264 500 aaPredicted RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 PDCP20941 246 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 MUTP22033 750 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 PRPHP41219 470 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 SARSP49591 514 aaKnown RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 RARRES1P49788 294 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 PDIA5Q14554 519 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 DSC3Q14574 896 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 EMC2Q15006 297 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 SLC24A5Q71RS6 500 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 RHPN2Q8IUC4 686 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 NPAS4Q8IUM7 802 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 PIGOQ8TEQ8 1089 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 SNX21Q969T3 373 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 SAMD11Q96NU1 681 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 GCOM2Q9BZD3 368 aaPredicted RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 XPNPEP1Q9NQW7 623 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
SMG6-206ENST00000570668 ARID2Q68CP9 1835 aa12.43□□□□□ -0.42
SMG6-206ENST00000570668 A0A087WZ62 844 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 DENND3A2RUS2 1198 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 RFXAPO00287 272 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 ASAP2O43150 1006 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 DGAT1O75907 488 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 IGFBP4P22692 258 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 FAM189BP81408 668 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
SMG6-206ENST00000570668 HAUS3Q68CZ6 603 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 FERMT3Q86UX7 667 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 KSR1Q8IVT5 923 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
SMG6-206ENST00000570668 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 NACC1Q96RE7 527 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 MTRQ99707 1265 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 FDXACB1Q9BRP7 624 aaPredicted RBP12.42□□□□□ -0.42
SMG6-206ENST00000570668 RAB34Q9BZG1 259 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
SMG6-206ENST00000570668 IFT122Q9HBG6 1241 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 DBR1Q9UK59 544 aaKnown RBP12.42□□□□□ -0.42
SMG6-206ENST00000570668 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
SMG6-206ENST00000570668 ADGRA3Q8IWK6 1321 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 A0A087WWV3 80 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 LPXNO60711 386 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 CSDE1O75534 798 aaKnown RBP12.41□□□□□ -0.42
SMG6-206ENST00000570668 ZSCAN20P17040 1043 aaPredicted RBP12.41□□□□□ -0.42
SMG6-206ENST00000570668 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 GRB10Q13322 594 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 IL17AQ16552 155 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 DTHD1Q6ZMT9 781 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 NLRP4Q96MN2 994 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
SMG6-206ENST00000570668 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 ELAC1Q9H777 363 aaKnown RBP12.41□□□□□ -0.42
SMG6-206ENST00000570668 ATP6V0A4Q9HBG4 840 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
SMG6-206ENST00000570668 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms