RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 HEMGNQ9BXL5 484 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
CIITA-204ENST00000570546 FBXL5Q9UKA1 691 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 FAM187AA6NFU0 413 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 SLC16A4O15374 487 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 ACTN1P12814 892 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 RFFLQ8WZ73 363 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 ADAM22Q9P0K1 906 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 AKT3Q9Y243 479 aa16.48■□□□□ 0.23
CIITA-204ENST00000570546 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 MAPK13O15264 365 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 CCNI2Q6ZMN8 369 aaPredicted RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 EXOC8Q8IYI6 725 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 PITPNM3Q9BZ71 974 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 Q9H521 79 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 ZWILCHQ9H900 591 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 HAUS2Q9NVX0 235 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 HPCAL4Q9UM19 191 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 PPM1FP49593 454 aaPredicted RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 K7ERI5 159 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 OSTNP61366 133 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 ZNF449Q6P9G9 518 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 ERICH1Q86X53 443 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 PDCD7Q8N8D1 485 aaKnown RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 SSU72P8A0A1W2PR75 194 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 CAV1Q03135 178 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 SH2D4BQ5SQS7 431 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 OR6B2Q6IFH4 312 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 GBP7Q8N8V2 638 aaPredicted RBP16.47■□□□□ 0.23
CIITA-204ENST00000570546 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 TECPR2O15040 1411 aa16.47■□□□□ 0.23
CIITA-204ENST00000570546 MYMKA6NI61 221 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 PDXKO00764 312 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 RFX1P22670 979 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 KCTD2Q14681 263 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 SURF1Q15526 300 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 HVCN1Q96D96 273 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 A0A1W2PQJ5 194 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 F5H6K3 240 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 CAMTA2O94983 1202 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 TRIM49P0CI25 452 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 TRIM49CP0CI26 452 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 ECE1P42892 770 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 KLK7P49862 253 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 KLRC3Q07444 240 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 TAF11Q15544 211 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
CIITA-204ENST00000570546 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
CIITA-204ENST00000570546 PSMA2P25787 234 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 PEX19P40855 299 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 GUCY1A3Q02108 690 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 SEPT6Q14141 434 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 RPS6KA2Q15349 733 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 RBM41Q96IZ5 413 aaKnown RBP16.46■□□□□ 0.23
CIITA-204ENST00000570546 NACA2Q9H009 215 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 HPSEQ9Y251 543 aa16.46■□□□□ 0.23
CIITA-204ENST00000570546 IQANK1A0A1B0GTG1 560 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 ZRANB2O95218 330 aaKnown RBP eCLIP16.46■□□□□ 0.22
CIITA-204ENST00000570546 LDHAP00338 332 aaKnown RBP16.46■□□□□ 0.22
CIITA-204ENST00000570546 SPARCL1Q14515 664 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.22
CIITA-204ENST00000570546 PDIK1LQ8N165 341 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 APOL6Q9BWW8 343 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 WNT8AQ9H1J5 351 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 ATP6V0A4Q9HBG4 840 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 AMACRQ9UHK6 382 aa16.46■□□□□ 0.22
CIITA-204ENST00000570546 SLC16A3O15427 465 aaKnown RBP16.45■□□□□ 0.22
CIITA-204ENST00000570546 PRPSAP1Q14558 356 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 RASA4BC9J798 803 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 RASA4O43374 803 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 EYA4O95677 639 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 PASD1Q8IV76 773 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 MORC4Q8TE76 937 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 LXNQ9BS40 222 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 TBC1D22BQ9NU19 505 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 N4BP2L2Q92802 583 aaPredicted RBP16.45■□□□□ 0.22
CIITA-204ENST00000570546 UBE2Q2LH0YL09 131 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 P4HBP07237 508 aaKnown RBP16.45■□□□□ 0.22
CIITA-204ENST00000570546 ASPHQ12797 758 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 ICE2Q659A1 982 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 CCDC137Q6PK04 289 aaKnown RBP16.45■□□□□ 0.22
CIITA-204ENST00000570546 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
CIITA-204ENST00000570546 WDR64B1ANS9 1081 aa16.44■□□□□ 0.22
CIITA-204ENST00000570546 KCNQ2O43526 872 aa16.44■□□□□ 0.22
CIITA-204ENST00000570546 ITKQ08881 620 aa16.44■□□□□ 0.22
CIITA-204ENST00000570546 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
CIITA-204ENST00000570546 DHX34Q14147 1143 aaKnown RBP16.44■□□□□ 0.22
CIITA-204ENST00000570546 CEP120Q8N960 986 aa16.44■□□□□ 0.22
CIITA-204ENST00000570546 HSPH1Q92598 858 aa16.44■□□□□ 0.22
CIITA-204ENST00000570546 THOC1Q96FV9 657 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms