RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ITIH3Q06033 890 aa16.59■□□□□ 0.25
USP43-202ENST00000570475 STXBP4Q6ZWJ1 553 aa16.59■□□□□ 0.25
USP43-202ENST00000570475 TMBIM4Q9HC24 238 aa16.59■□□□□ 0.25
USP43-202ENST00000570475 INTS9Q9NV88 658 aaKnown RBP16.59■□□□□ 0.25
USP43-202ENST00000570475 SAMD15Q9P1V8 674 aa16.59■□□□□ 0.25
USP43-202ENST00000570475 CALCOCO2Q13137 446 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 C2CD6Q53TS8 623 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 TAB3Q8N5C8 712 aaPredicted RBP16.58■□□□□ 0.25
USP43-202ENST00000570475 SLC20A1Q8WUM9 679 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 SLC35C1Q96A29 364 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 C18orf8Q96DM3 657 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 ARHGEF26Q96DR7 871 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 PSMD1Q99460 953 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 STK38LQ9Y2H1 464 aa16.58■□□□□ 0.25
USP43-202ENST00000570475 EDIL3O43854 480 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 NDUFB10O96000 172 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 MMEP08473 750 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 BMP3P12645 472 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 QPCTQ16769 361 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 ANKS4BQ8N8V4 417 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 GDAP1Q8TB36 358 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 RAPGEF5Q92565 580 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
USP43-202ENST00000570475 USTQ9Y2C2 406 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 CNTNAP4Q9C0A0 1308 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 FOXN3O00409 490 aaPredicted RBP16.58■□□□□ 0.24
USP43-202ENST00000570475 LCA5LO95447 670 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 FAM107AO95990 144 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 DLATP10515 647 aaKnown RBP16.58■□□□□ 0.24
USP43-202ENST00000570475 LMNB1P20700 586 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 GUCY2CP25092 1073 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 SOX5P35711 763 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 SLC12A3P55017 1021 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 EPC2Q52LR7 807 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 PALB2Q86YC2 1186 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 CCDC13Q8IYE1 715 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 UBL4BQ8N7F7 174 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 FBXO25Q8TCJ0 367 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 SYN2Q92777 582 aaPredicted RBP16.58■□□□□ 0.24
USP43-202ENST00000570475 TACO1Q9BSH4 297 aaKnown RBP16.58■□□□□ 0.24
USP43-202ENST00000570475 SWAP70Q9UH65 585 aa16.58■□□□□ 0.24
USP43-202ENST00000570475 CASZ1Q86V15 1759 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 PDXKO00764 312 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 GRIPAP1Q4V328 841 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 TBC1D1Q86TI0 1168 aaPredicted RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 ZNF577Q9BSK1 485 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 TAOK3Q9H2K8 898 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 SHBGP04278 402 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 RPA1P27694 616 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 NF2P35240 595 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 HOOK3Q86VS8 718 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 SEC16BQ96JE7 1060 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 INTS2Q9H0H0 1204 aaKnown RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 FAM114A2Q9NRY5 505 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 UBR2Q8IWV8 1755 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 CCDC188H7C350 402 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 CALCAP01258 141 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 GBP2P32456 591 aaPredicted RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 FMO5P49326 533 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 ITGB3BPQ13352 177 aaPredicted RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 SLC29A2Q14542 456 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 CBWD6Q4V339 395 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 CBWD3Q5JTY5 395 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 CBWD5Q5RIA9 395 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 HP1BP3Q5SSJ5 553 aaPredicted RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 RINT1Q6NUQ1 792 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 SLC30A5Q8TAD4 765 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 PIK3R5Q8WYR1 880 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 FAM84AQ96KN4 292 aa16.57■□□□□ 0.24
USP43-202ENST00000570475 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
USP43-202ENST00000570475 ABCB11O95342 1321 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 BCRP11274 1271 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 SKOR1P84550 965 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 KIRREL3Q8IZU9 778 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 SYT2Q8N9I0 419 aaPredicted RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 C1orf54Q8WWF1 131 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 PLCB1Q9NQ66 1216 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 KLC4Q9NSK0 619 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 CHN1P15882 459 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 MARCKSL1P49006 195 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 UAP1Q16222 522 aaPredicted RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 RPUSD2Q8IZ73 545 aaKnown RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 BICD1Q96G01 975 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 NAP1L3Q99457 506 aaPredicted RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 ALG6Q9Y672 507 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 EMSYQ7Z589 1322 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 SNED1Q8TER0 1413 aa16.56■□□□□ 0.24
USP43-202ENST00000570475 EIF4E1BA6NMX2 242 aaKnown RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 HSPA9P38646 679 aaKnown RBP16.56■□□□□ 0.24
USP43-202ENST00000570475 ECE1P42892 770 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms