RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 GLG1Q92896 1179 aa12.02□□□□□ -0.48
PDXDC1-216ENST00000569715 TMEM143Q96AN5 459 aa12.02□□□□□ -0.48
PDXDC1-216ENST00000569715 POLR3FQ9H1D9 316 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-216ENST00000569715 ADCY6O43306 1168 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 MFAP3LO75121 409 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 POLGP54098 1239 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 FAM160B1Q5W0V3 765 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 PPFIBP1Q86W92 1011 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 TINF2Q9BSI4 451 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 TMX1Q9H3N1 280 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 AGPAT3Q9NRZ7 376 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 A0A1W2PQC6 194 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 TMEM88BA6NKF7 163 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 CCDC169A6NNP5 214 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 AKR1B15C9JRZ8 316 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 LGR5O75473 907 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 TPM2P07951 284 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 CLCN1P35523 988 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 STXBP4Q6ZWJ1 553 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 GBP3Q9H0R5 595 aa12.02□□□□□ -0.49
PDXDC1-216ENST00000569715 USP27XA6NNY8 438 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 MAPTP10636 758 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 CTGFP29279 349 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 MCPH1Q8NEM0 835 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 KIFAP3Q92845 792 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 DHX33Q9H6R0 707 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 MGAMO43451 1857 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 RBM47A0AV96 593 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 CYP2J2P51589 502 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 GTF2BQ00403 316 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.493e-6■■□□□ 12.8
PDXDC1-216ENST00000569715 SYCP3Q8IZU3 236 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 ZHX1Q9UKY1 873 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 ZBTB42B2RXF5 422 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 DRP2Q13474 957 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 CCL14Q16627 93 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 PRAMEF19Q5SWL8 479 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 ERGIC2Q96RQ1 377 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.493e-8■■□□□ 11.8
PDXDC1-216ENST00000569715 EMSYQ7Z589 1322 aa12.01□□□□□ -0.49
PDXDC1-216ENST00000569715 TTC26A0AVF1 554 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 EPHB6O15197 1021 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 GNA14O95837 355 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 SMPD1P17405 629 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 INHBEP58166 350 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 SREBF2Q12772 1141 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 MAP2K5Q13163 448 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 PLCB4Q15147 1175 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 HS2ST1Q7LGA3 356 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 ZSWIM2Q8NEG5 633 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 TRAPPC12Q8WVT3 735 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 TTYH3Q9C0H2 523 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 ST6GALNAC4Q9H4F1 302 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 KMT5AQ9NQR1 393 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 SIK3Q9Y2K2 1263 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 FKBP15Q5T1M5 1219 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 AFG1LQ8WV93 481 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 ZFYVE28Q9HCC9 887 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12□□□□□ -0.49
PDXDC1-216ENST00000569715 DENND3A2RUS2 1198 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 RPL13P26373 211 aaKnown RBP12□□□□□ -0.49
PDXDC1-216ENST00000569715 ACVR2BQ13705 512 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 ACCSQ96QU6 501 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 BAG1Q99933 345 aaPredicted RBP12□□□□□ -0.49
PDXDC1-216ENST00000569715 CBWD1Q9BRT8 395 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 PCIF1Q9H4Z3 704 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 NRBP2Q9NSY0 501 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 SPTLC3Q9NUV7 552 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 ARMCX3Q9UH62 379 aaPredicted RBP12□□□□□ -0.49
PDXDC1-216ENST00000569715 SIP14410 1827 aa12□□□□□ -0.49
PDXDC1-216ENST00000569715 GH1P01241 217 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 ZNF286BP0CG31 522 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 ALCAMQ13740 583 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 TAS1R3Q7RTX0 852 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 SPIRE2Q8WWL2 714 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 SLC7A3Q8WY07 619 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 USP6NLQ92738 828 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 LENG1Q96BZ8 264 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 AGPAT5Q9NUQ2 364 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 DMAC2Q9NW81 257 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 TBX20Q9UMR3 447 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 AOC2O75106 756 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 GLRA2P23416 452 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 TM4SF4P48230 202 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 APBA1Q02410 837 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 NFIL3Q16649 462 aa11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-216ENST00000569715 PLPPR4Q7Z2D5 763 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms