RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SMC2O95347 1197 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 ZNF131P52739 623 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 MDM2Q00987 491 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-212ENST00000569575 BFSP2Q13515 415 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 GIT2Q14161 759 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 POSTNQ15063 836 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 KLHL40Q2TBA0 621 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 CCDC65Q8IXS2 484 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 KIAA0319LQ8IZA0 1049 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 IFT74Q96LB3 600 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 SH2D3AQ9BRG2 576 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 EVPLQ92817 2033 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 H0YCG3 227 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 PARNO95453 639 aaKnown RBP25.98■■□□□ 1.75
RAB40C-212ENST00000569575 TFDP1Q14186 410 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 HIC1Q14526 733 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 ZNF410Q86VK4 478 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 GPT2Q8TD30 523 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 KCNN1Q92952 543 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 DNAJC19Q96DA6 116 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 REEP2Q9BRK0 252 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 NTPCRQ9BSD7 190 aaKnown RBP25.98■■□□□ 1.75
RAB40C-212ENST00000569575 PARVGQ9HBI0 331 aa25.98■■□□□ 1.75
RAB40C-212ENST00000569575 SUCLA2Q9P2R7 463 aaPredicted RBP25.98■■□□□ 1.75
RAB40C-212ENST00000569575 FRMD3A2A2Y4 597 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 M0QZ92 97 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 PITPNM1O00562 1244 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 MAPTP10636 758 aaKnown RBP25.97■■□□□ 1.75
RAB40C-212ENST00000569575 AFMP43652 599 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 SMTNP53814 917 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 ATN1P54259 1190 aaPredicted RBP25.97■■□□□ 1.75
RAB40C-212ENST00000569575 TLE2Q04725 743 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 PCBP1Q15365 356 aaKnown RBP eCLIP25.97■■□□□ 1.75
RAB40C-212ENST00000569575 FAM102BQ5T8I3 360 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 UNC13DQ70J99 1090 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 SPIRE2Q8WWL2 714 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 GSDMAQ96QA5 445 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 NFKBIZQ9BYH8 718 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 TRMT13Q9NUP7 481 aaKnown RBP25.97■■□□□ 1.75
RAB40C-212ENST00000569575 SQORQ9Y6N5 450 aa25.97■■□□□ 1.75
RAB40C-212ENST00000569575 HIP1RO75146 1068 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 FAM13AO94988 1023 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 PLS3P13797 630 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 NAMPTP43490 491 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 PSMD2Q13200 908 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 NFKBIBQ15653 356 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 PRPF31Q8WWY3 499 aaKnown RBP25.96■■□□□ 1.75
RAB40C-212ENST00000569575 CTAGE1Q96RT6 745 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 TRPV6Q9H1D0 765 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 NUP62CLQ9H1M0 184 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 CLSTN2Q9H4D0 955 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 RMND1Q9NWS8 449 aa25.96■■□□□ 1.75
RAB40C-212ENST00000569575 PQBP1O60828 265 aaKnown RBP25.95■■□□□ 1.74
RAB40C-212ENST00000569575 ASIC1P78348 528 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 ZNF200P98182 395 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-212ENST00000569575 DPYDQ12882 1025 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 DMP1Q13316 513 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-212ENST00000569575 MKRN4PQ13434 485 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-212ENST00000569575 KCNB1Q14721 858 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 TRIM60Q495X7 471 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 FAM26DQ5JW98 314 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 LRRC71Q8N4P6 559 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 SPATA20Q8TB22 786 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 INO80BQ9C086 356 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-212ENST00000569575 POLR3FQ9H1D9 316 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-212ENST00000569575 OLFML3Q9NRN5 406 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 AKT3Q9Y243 479 aa25.95■■□□□ 1.74
RAB40C-212ENST00000569575 CLTBP09497 229 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 FAAP100Q0VG06 881 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 MAPK7Q13164 816 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 LRRC26Q2I0M4 334 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 NT5DC1Q5TFE4 455 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 DYMQ7RTS9 669 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 IFNLR1Q8IU57 520 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-212ENST00000569575 USP38Q8NB14 1042 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 DNAJB3Q8WWF6 145 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 TMEM143Q96AN5 459 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 C2orf40Q9H1Z8 148 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 PANK4Q9NVE7 773 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 MYH11P35749 1972 aa25.94■■□□□ 1.74
RAB40C-212ENST00000569575 CLCN3P51790 818 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 EFNA5P52803 228 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 LAMTOR4Q0VGL1 99 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 CUL4BQ13620 913 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 ALCAMQ13740 583 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 ODR4Q5SWX8 454 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 RUFY4Q6ZNE9 571 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 DAW1Q8N136 415 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 STAMQ92783 540 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 ST6GALNAC4Q9H4F1 302 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 ATP11BQ9Y2G3 1177 aa25.93■■□□□ 1.74
RAB40C-212ENST00000569575 LETM1O95202 739 aaPredicted RBP25.92■■□□□ 1.74
RAB40C-212ENST00000569575 IDEP14735 1019 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 GLRA2P23416 452 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 CRYBB1P53674 252 aaPredicted RBP25.92■■□□□ 1.74
RAB40C-212ENST00000569575 SOX10P56693 466 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 MRPS6P82932 125 aaKnown RBP25.92■■□□□ 1.74
RAB40C-212ENST00000569575 TRIM71Q2Q1W2 868 aaKnown RBP25.92■■□□□ 1.74
RAB40C-212ENST00000569575 STXBP4Q6ZWJ1 553 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 SRGAP1Q7Z6B7 1085 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms