RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 GPBP1Q86WP2 473 aa18.59■□□□□ 0.57
COMMD4-224ENST00000568877 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
COMMD4-224ENST00000568877 PRPF31Q8WWY3 499 aaKnown RBP18.59■□□□□ 0.57
COMMD4-224ENST00000568877 PSPC1Q8WXF1 523 aaKnown RBP18.59■□□□□ 0.57
COMMD4-224ENST00000568877 TIPINQ9BVW5 301 aa18.59■□□□□ 0.57
COMMD4-224ENST00000568877 ZMYND8Q9ULU4 1186 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-224ENST00000568877 RSPH10B2B2RC85 870 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 M0QZ92 97 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 CHRNA1P02708 482 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 IQCF3P0C7M6 154 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 RSPH10BP0C881 870 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 SYN1P17600 705 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 CCL23P55773 120 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 CDC42EP1Q00587 391 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 MGAT3Q09327 533 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 RHPN2Q8IUC4 686 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 POLR3FQ9H1D9 316 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-224ENST00000568877 WNT8AQ9H1J5 351 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 TNMDQ9H2S6 317 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 MAGEF1Q9HAY2 307 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 GPRC5CQ9NQ84 441 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 USP25Q9UHP3 1055 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 SERTAD1Q9UHV2 236 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 TRPV2Q9Y5S1 764 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 CDY2AQ9Y6F7 541 aa18.58■□□□□ 0.56
COMMD4-224ENST00000568877 ASAP2O43150 1006 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 HIP1RO75146 1068 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 GPR32O75388 356 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 SLFN14P0C7P3 912 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 GPC3P51654 580 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 NLRP11P59045 1033 aaKnown RBP18.57■□□□□ 0.56
COMMD4-224ENST00000568877 UBE2HP62256 183 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 RAD51AP2Q09MP3 1159 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 LAMTOR4Q0VGL1 99 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 MXD4Q14582 209 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-224ENST00000568877 LONRF3Q496Y0 759 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 CEP57L1Q8IYX8 460 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 KIFAP3Q92845 792 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 PPP1R16BQ96T49 567 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 CELF4Q9BZC1 486 aaKnown RBP18.57■□□□□ 0.56
COMMD4-224ENST00000568877 POLD4Q9HCU8 107 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 KBTBD4Q9NVX7 518 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 COL4A3BPQ9Y5P4 624 aa18.57■□□□□ 0.56
COMMD4-224ENST00000568877 NPHP3-ACAD11A0A0J9YXS1 232 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 MYMKA6NI61 221 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 ACTN4O43707 911 aaKnown RBP18.56■□□□□ 0.56
COMMD4-224ENST00000568877 ZNF202O95125 648 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 PARNO95453 639 aaKnown RBP18.56■□□□□ 0.56
COMMD4-224ENST00000568877 KRT18P05783 430 aaKnown RBP18.56■□□□□ 0.56
COMMD4-224ENST00000568877 KIZQ2M2Z5 673 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 KSR1Q8IVT5 923 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 FMR1NBQ8N0W7 255 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-224ENST00000568877 TMEM199Q8N511 208 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 ENGASEQ8NFI3 743 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 ASAP3Q8TDY4 903 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 STAMQ92783 540 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 BADQ92934 168 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 SCLYQ96I15 445 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 DRC1Q96MC2 740 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 LRRC27Q9C0I9 530 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 ADAMTS10Q9H324 1103 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 CDHR5Q9HBB8 845 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 PCDH10Q9P2E7 1040 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 GINS2Q9Y248 185 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 LOXHD1Q8IVV2 1947 aa18.56■□□□□ 0.56
COMMD4-224ENST00000568877 GOLGA6L22H0YM25 854 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 GLRA2P23416 452 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 CRYBB1P53674 252 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-224ENST00000568877 AMPD3Q01432 767 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 FAM160A1Q05DH4 1040 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 MAPK7Q13164 816 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 GIT2Q14161 759 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 ZNF410Q86VK4 478 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 DAW1Q8N136 415 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 NLRP7Q8WX94 980 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 DDX12PQ92771 950 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 ZNF668Q96K58 619 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-224ENST00000568877 NLRP4Q96MN2 994 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 REEP2Q9BRK0 252 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 ODF2LQ9ULJ1 636 aa18.55■□□□□ 0.56
COMMD4-224ENST00000568877 A0A087WZ62 844 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 SRGAP2CP0DJJ0 459 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 LIG1P18858 919 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 RFC2P35250 354 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-224ENST00000568877 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
COMMD4-224ENST00000568877 TFDP1Q14186 410 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 MBTPS1Q14703 1052 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 GPNMBQ14956 572 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 KRBA2Q6ZNG9 492 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 DYMQ7RTS9 669 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 RNF149Q8NC42 400 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 CNNM3Q8NE01 707 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 PAGE5Q96GU1 130 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 SCLT1Q96NL6 688 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 OSMRQ99650 979 aa18.54■□□□□ 0.56
COMMD4-224ENST00000568877 LBHD1Q9BQE6 289 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-224ENST00000568877 FDXACB1Q9BRP7 624 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-224ENST00000568877 LMBRD1Q9NUN5 540 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms