RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 MRPL9Q9BYD2 267 aaKnown RBP13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 DZANK1Q9NVP4 752 aa13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 DBR1Q9UK59 544 aaKnown RBP13.4□□□□□ -0.26
GTF3C1-209ENST00000568569 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 MAGEB2O15479 319 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 METAP2P50579 478 aaKnown RBP eCLIP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 CLCN3P51790 818 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 NLRP11P59045 1033 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 CLLU1OSQ5K130 101 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 ATAT1Q5SQI0 421 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 SGMS1Q86VZ5 419 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 TMEM87AQ8NBN3 555 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 TMEM169Q96HH4 297 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 GLT8D2Q9H1C3 349 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 RBM28Q9NW13 759 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 TCEAL9Q9UHQ7 104 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 AKT3Q9Y243 479 aa13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
GTF3C1-209ENST00000568569 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 DHX15O43143 795 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 CXCL14O95715 111 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 EOMESO95936 686 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 TMOD1P28289 359 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ID4P47928 161 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ZNF746Q6NUN9 644 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ZNF713Q8N859 430 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 FLCNQ8NFG4 579 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 RSPH1Q8WYR4 309 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ZNF577Q9BSK1 485 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 ADAMTS10Q9H324 1103 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
GTF3C1-209ENST00000568569 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 CARNS1A5YM72 827 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 SMCO2A6NFE2 343 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 BCAR1P56945 870 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 COL9A3Q14050 684 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 GIT2Q14161 759 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 EFCAB12Q6NXP0 572 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 VPS52Q8N1B4 723 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 C12orf76Q8N812 135 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 HELQQ8TDG4 1101 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 LRRC2Q9BYS8 371 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 ZBP1Q9H171 429 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 CYP26B1Q9NR63 512 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 BARHL2Q9NY43 387 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 DACT1Q9NYF0 836 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 IRAK3Q9Y616 596 aa13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 EP300Q09472 2414 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-209ENST00000568569 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 SLC27A2O14975 620 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 PSAPP07602 524 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 CTSAP10619 480 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 EPCAMP16422 314 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 AOC1P19801 751 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 APOA5Q6Q788 366 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 CCDC149Q6ZUS6 474 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 CABP7Q86V35 215 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 LINC01465Q8N7H1 131 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 PCDHA10Q9Y5I2 948 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 DMXL1Q9Y485 3027 aa13.36□□□□□ -0.27
GTF3C1-209ENST00000568569 MYO10Q9HD67 2058 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 DNAH14Q0VDD8 3507 aa13.35□□□□□ -0.27
GTF3C1-209ENST00000568569 CYP3A4P08684 503 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms