RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 DDR1Q08345 913 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 KCNAB2Q13303 367 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-217ENST00000567817 MBLAC2Q68D91 279 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 CIAPIN1Q6FI81 312 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 IFNL2Q8IZJ0 200 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 FAM43AQ8N2R8 423 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 MZB1Q8WU39 189 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 LRRCC1Q9C099 1032 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 TAOK3Q9H2K8 898 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 TAF1DQ9H5J8 278 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-217ENST00000567817 GULP1Q9UBP9 304 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 ASAP1Q9ULH1 1129 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 CNOT6Q9ULM6 557 aaKnown RBP6.31□□□□□ -1.4
CAPN3-217ENST00000567817 ABT1Q9ULW3 272 aaKnown RBP6.31□□□□□ -1.4
CAPN3-217ENST00000567817 IRAK3Q9Y616 596 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 RGPD2P0DJD1 1756 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 CEMIPQ8WUJ3 1361 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 TNRC18O15417 2968 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-217ENST00000567817 FSD2A1L4K1 749 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 ERVV-2B6SEH9 535 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 NUAK1O60285 661 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 CAPNS1P04632 268 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 GSPT1P15170 499 aaKnown RBP6.3□□□□□ -1.4
CAPN3-217ENST00000567817 TM4SF1P30408 202 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 GFRA1P56159 465 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 ATP8B2P98198 1209 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 TESK1Q15569 626 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 ST13P5Q8NFI4 369 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-217ENST00000567817 ARMC5Q96C12 935 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 IL17RAQ96F46 866 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 SGSM3Q96HU1 749 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 CAPNS2Q96L46 248 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 GPR101Q96P66 508 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-217ENST00000567817 MEIS3Q99687 375 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 FBLN5Q9UBX5 448 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 HACL1Q9UJ83 578 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 NUDT5Q9UKK9 219 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 ADAMTSL1Q8N6G6 1762 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 NRXN2Q9P2S2 1712 aa6.3□□□□□ -1.4
CAPN3-217ENST00000567817 A0A1W2PQU0 124 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 F8W031 263 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-217ENST00000567817 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-217ENST00000567817 UBTFL1P0CB47 393 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-217ENST00000567817 SDSP20132 328 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 ECI1P42126 302 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 PDE1AP54750 535 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 PPP2R2AP63151 447 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 LTBP1Q14766 1721 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 PLEKHO1Q53GL0 409 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-217ENST00000567817 WWC2Q6AWC2 1192 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 SIAH1Q8IUQ4 282 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 DIO2Q92813 273 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
CAPN3-217ENST00000567817 PEX11GQ96HA9 241 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 STAP2Q9UGK3 403 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
CAPN3-217ENST00000567817 MSRB2Q9Y3D2 182 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 KCTD3Q9Y597 815 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 PCDHA5Q9Y5H7 936 aa6.29□□□□□ -1.4
CAPN3-217ENST00000567817 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 FER1L6Q2WGJ9 1857 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 ZC3H12DA2A288 527 aaKnown RBP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 PPP1R11O60927 126 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 DDNO94850 711 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 PFKLP17858 780 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 MX1P20591 662 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 EPHX2P34913 555 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 KCNJ6P48051 423 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 GTF2A2P52657 109 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 ZNF200P98182 395 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 MAP4K2Q12851 820 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 SSPNQ14714 243 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 INF2Q27J81 1249 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 KLHL40Q2TBA0 621 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 SPOCD1Q6ZMY3 1216 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 C2CD5Q86YS7 1000 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 ERC1Q8IUD2 1116 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 IGDCC3Q8IVU1 814 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 CNTROBQ8N137 903 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 KREMEN2Q8NCW0 462 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 SSH3Q8TE77 659 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 ANP32BQ92688 251 aaKnown RBP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 ZNF669Q96BR6 464 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 TSPAN17Q96FV3 270 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 C1orf159Q96HA4 380 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 DDX21Q9NR30 783 aaKnown RBP eCLIP6.28□□□□□ -1.4
CAPN3-217ENST00000567817 MARCH2Q9P0N8 246 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 DLG5Q8TDM6 1919 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 CCDC88AQ3V6T2 1871 aa6.28□□□□□ -1.4
CAPN3-217ENST00000567817 SALL3Q9BXA9 1300 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 MYO1BO43795 1136 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 ALDH1L1O75891 902 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 ZSCAN22P10073 491 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-217ENST00000567817 PHKG2P15735 406 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 PI3P19957 117 aa6.27□□□□□ -1.41
CAPN3-217ENST00000567817 CRKLP46109 303 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms