RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TMEM117Q9H0C3 514 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 EPHX3Q9H6B9 360 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 IGKV6-21A0A0C4DH24 114 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 TBX3O15119 743 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 DARSP14868 501 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 IL9P15248 144 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 LAG3P18627 525 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 SCRN1Q12765 414 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 FAM102BQ5T8I3 360 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 ADHFE1Q8IWW8 467 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 CDCA3Q99618 268 aaPredicted RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 TYW1Q9NV66 732 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-204ENST00000564664 WDR81Q562E7 1941 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 A0A0U1RQF3 1178 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 STBD1O95210 358 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 TDP2O95551 362 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 EYA4O95677 639 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 SKIP12755 728 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 DNAJB1P25685 340 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 PLCB3Q01970 1234 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 SMAD2Q15796 467 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 UGCGQ16739 394 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 INF2Q27J81 1249 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 LETM2Q2VYF4 491 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 ECHDC2Q86YB7 292 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 LRRC71Q8N4P6 559 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 NLRP7Q8WX94 980 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 CEP89Q96ST8 783 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 IGFLR1Q9H665 355 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 CD320Q9NPF0 282 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
GTF3C1-204ENST00000564664 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 MAFO75444 373 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 FGF18O76093 207 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 QARSP47897 775 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 GATMP50440 423 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 KRT17Q04695 432 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 ZP2Q05996 745 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 COASYQ13057 564 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 SMAD4Q13485 552 aaKnown RBP13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 COLGALT1Q8NBJ5 622 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 MICAL1Q8TDZ2 1067 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 CASD1Q96PB1 797 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 LRFN3Q9BTN0 628 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 CWH43Q9H720 699 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 KCNMB3Q9NPA1 279 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 TLR9Q9NR96 1032 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 TPCN1Q9ULQ1 816 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
GTF3C1-204ENST00000564664 MBTPS2O43462 519 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 MARCH6O60337 910 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 PPM1AP35813 382 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 NDUFV1P49821 464 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 MTERF2Q49AM1 385 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 LRRC43Q8N309 656 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 GJA10Q969M2 543 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 AIFM3Q96NN9 605 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 TLE6Q9H808 572 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 NGRNQ9NPE2 291 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-204ENST00000564664 FSCN2O14926 492 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 ASAP2O43150 1006 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 GAS2O43903 313 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 FGFR1P11362 822 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 IBSPP21815 317 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 GTF2F1P35269 517 aaKnown RBP eCLIP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 IRS1P35568 1242 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 DLX2Q07687 328 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 EPHA7Q15375 998 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms