RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SCNN1BP51168 640 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 KPNA1P52294 538 aaPredicted RBP6.96□□□□□ -1.3
UBR1-205ENST00000564540 SMAD3P84022 425 aaKnown RBP6.96□□□□□ -1.3
UBR1-205ENST00000564540 HGFACQ04756 655 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 ADCY1Q08828 1119 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 ACAP1Q15027 740 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 PHYKPLQ8IUZ5 450 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 FUKQ8N0W3 1084 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 AHI1Q8N157 1196 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 LEO1Q8WVC0 666 aaPredicted RBP6.96□□□□□ -1.3
UBR1-205ENST00000564540 KLC2Q9H0B6 622 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 MS4A5Q9H3V2 200 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 SPTLC3Q9NUV7 552 aa6.96□□□□□ -1.3
UBR1-205ENST00000564540 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
UBR1-205ENST00000564540 PUF60Q9UHX1 559 aaKnown RBP6.96□□□□□ -1.3
UBR1-205ENST00000564540 LCHNA4D1U4 455 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 PRPF6O94906 941 aaKnown RBP6.95□□□□□ -1.3
UBR1-205ENST00000564540 STAT3P40763 770 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 ADCY2Q08462 1091 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 DUSP8Q13202 625 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 SART3Q15020 963 aaKnown RBP6.95□□□□□ -1.3
UBR1-205ENST00000564540 CDSNQ15517 529 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 DGKDQ16760 1214 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 OR14A2Q96R54 314 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 PLA2G12BQ9BX93 195 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 KCMF1Q9P0J7 381 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 DENND2AQ9ULE3 1009 aa6.95□□□□□ -1.3
UBR1-205ENST00000564540 ADCYAP1R1P41586 468 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 IL2P60568 153 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 TIGD7Q6NT04 549 aaPredicted RBP6.94□□□□□ -1.3
UBR1-205ENST00000564540 KLHDC10Q6PID8 442 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 KANSL1Q7Z3B3 1105 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 ZZZ3Q8IYH5 903 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 GPR135Q8IZ08 494 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 OR2W6PQ8NHA6 318 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 DYDC2Q96IM9 177 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 ZNF496Q96IT1 587 aaPredicted RBP6.94□□□□□ -1.3
UBR1-205ENST00000564540 MTG2Q9H4K7 406 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 TMA7Q9Y2S6 64 aaKnown RBP6.94□□□□□ -1.3
UBR1-205ENST00000564540 VWA7Q9Y334 891 aa6.94□□□□□ -1.3
UBR1-205ENST00000564540 CTDP1Q9Y5B0 961 aaPredicted RBP6.94□□□□□ -1.3
UBR1-205ENST00000564540 ELL2O00472 640 aaPredicted RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 CD40P25942 277 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 SELENOPP49908 381 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 BCAR1P56945 870 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 ATP2C1P98194 919 aaPredicted RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 KRTAP1-1Q07627 177 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 LRRC32Q14392 662 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 PUM1Q14671 1186 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBR1-205ENST00000564540 R3HDM1Q15032 1099 aaKnown RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 PASD1Q8IV76 773 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 RPGRQ92834 1020 aaKnown RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 NKD2Q969F2 451 aaPredicted RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 AGO3Q9H9G7 860 aaKnown RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 DNAI1Q9UI46 699 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 MSRAQ9UJ68 235 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 TCAF1Q9Y4C2 921 aa6.93□□□□□ -1.3
UBR1-205ENST00000564540 RBM8AQ9Y5S9 174 aaKnown RBP6.93□□□□□ -1.3
UBR1-205ENST00000564540 C2orf78A6NCI8 922 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 SLC26A4O43511 780 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 RAD17O75943 681 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 FKBP9O95302 570 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 LSSP48449 732 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 SAFB2Q14151 953 aaKnown RBP eCLIP6.92□□□□□ -1.3
UBR1-205ENST00000564540 KIAA1841Q6NSI8 718 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 BMP8AQ7Z5Y6 402 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 THNSL2Q86YJ6 484 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 PITHD1Q9GZP4 211 aaPredicted RBP6.92□□□□□ -1.3
UBR1-205ENST00000564540 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 POLR3BQ9NW08 1133 aaPredicted RBP6.92□□□□□ -1.3
UBR1-205ENST00000564540 MAPRE3Q9UPY8 281 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 TSC22D4Q9Y3Q8 395 aa6.92□□□□□ -1.3
UBR1-205ENST00000564540 OPHN1O60890 802 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 H2AFYO75367 372 aaKnown RBP6.91□□□□□ -1.3
UBR1-205ENST00000564540 HNRNPLP14866 589 aaKnown RBP eCLIP6.91□□□□□ -1.3
UBR1-205ENST00000564540 SPRED1Q7Z699 444 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 RNF180Q86T96 592 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 UBR7Q8N806 425 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 GCDHQ92947 438 aaPredicted RBP6.91□□□□□ -1.3
UBR1-205ENST00000564540 GFM2Q969S9 779 aaKnown RBP6.91□□□□□ -1.3
UBR1-205ENST00000564540 WDR92Q96MX6 357 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 EMC7Q9NPA0 242 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 SLC30A1Q9Y6M5 507 aa6.91□□□□□ -1.3
UBR1-205ENST00000564540 A0A0A6YYJ9 748 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 C1QTNF3-AMACRE9PGA6 284 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 PCDH8O95206 1070 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 COMTP21964 271 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 HSD3B2P26439 372 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 ADCY7P51828 1080 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 SESN2P58004 480 aaPredicted RBP6.9□□□□□ -1.3
UBR1-205ENST00000564540 OCRLQ01968 901 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 FOXL1Q12952 345 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 TERF2Q15554 542 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 ZBTB41Q5SVQ8 909 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 SHCBP1Q8NEM2 672 aa6.9□□□□□ -1.3
UBR1-205ENST00000564540 SH3RF3Q8TEJ3 882 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms