RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 Q6ZUG5 572 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 ZNF713Q8N859 430 aaPredicted RBP11.52□□□□□ -0.57
SNX29-202ENST00000563308 KLHL23Q8NBE8 558 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 ZBTB10Q96DT7 871 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 CCDC136Q96JN2 1154 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 JAKMIP1Q96N16 626 aaKnown RBP11.52□□□□□ -0.57
SNX29-202ENST00000563308 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 JPH1Q9HDC5 661 aaPredicted RBP11.52□□□□□ -0.57
SNX29-202ENST00000563308 ERAP1Q9NZ08 941 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 DBR1Q9UK59 544 aaKnown RBP11.52□□□□□ -0.57
SNX29-202ENST00000563308 SIT1Q9Y3P8 196 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 PCDHGA2Q9Y5H1 932 aa11.52□□□□□ -0.57
SNX29-202ENST00000563308 SRRM3A6NNA2 597 aaPredicted RBP11.51□□□□□ -0.57
SNX29-202ENST00000563308 LAMTOR5O43504 91 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 DNAJB1P25685 340 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 MARK3P27448 753 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 ACTR2P61160 394 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 RBM10P98175 930 aaKnown RBP11.51□□□□□ -0.57
SNX29-202ENST00000563308 PPFIA1Q13136 1202 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 GRIK4Q16099 956 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 NTRK3Q16288 839 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 DUSP6Q16828 381 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 PDE12Q6L8Q7 609 aaKnown RBP11.51□□□□□ -0.57
SNX29-202ENST00000563308 LLGL2Q6P1M3 1020 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 BRF1Q92994 677 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 POMKQ9H5K3 350 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 AGO4Q9HCK5 861 aaKnown RBP11.51□□□□□ -0.57
SNX29-202ENST00000563308 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 NFASCO94856 1347 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 FRYLO94915 3013 aa11.51□□□□□ -0.57
SNX29-202ENST00000563308 IGLV3-22A0A075B6J6 115 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 FAM86B1E9PN63 330 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 DHX15O43143 795 aaKnown RBP11.5□□□□□ -0.57
SNX29-202ENST00000563308 PRPF3O43395 683 aaKnown RBP11.5□□□□□ -0.57
SNX29-202ENST00000563308 EDIL3O43854 480 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 FOXD2O60548 495 aaPredicted RBP11.5□□□□□ -0.57
SNX29-202ENST00000563308 ATG7O95352 703 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 CCNE2O96020 404 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 DCNP07585 359 aaKnown RBP11.5□□□□□ -0.57
SNX29-202ENST00000563308 FAM86B2P0C5J1 330 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 SCG2P13521 617 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 INSRRP14616 1297 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 METAP2P50579 478 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNX29-202ENST00000563308 EVCP57679 992 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 SPEM2Q0P670 501 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 AP3B2Q13367 1082 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 LPIN1Q14693 890 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNX29-202ENST00000563308 ZNF528Q3MIS6 628 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 JAKMIP3Q5VZ66 844 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 TAF2Q6P1X5 1199 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 BLOC1S2Q6QNY1 142 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 TMEM184AQ6ZMB5 413 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 GLG1Q92896 1179 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 ZMYND12Q9H0C1 365 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 GLT8D2Q9H1C3 349 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 WNT16Q9UBV4 365 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 DUSP12Q9UNI6 340 aa11.5□□□□□ -0.57
SNX29-202ENST00000563308 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.5□□□□□ -0.57
SNX29-202ENST00000563308 IGKV6D-21A0A0A0MT36 114 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 CYP3A4P08684 503 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 GHRP10912 638 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 UBE3AQ05086 875 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 PLCB4Q15147 1175 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 SPOUT1Q5T280 376 aaKnown RBP11.49□□□□□ -0.57
SNX29-202ENST00000563308 ABHD15Q6UXT9 468 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 NIPA1Q7RTP0 329 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 PLPPR4Q7Z2D5 763 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 DNAJB3Q8WWF6 145 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 CASP10Q92851 521 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 PHKBQ93100 1093 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 ADAM7Q9H2U9 754 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 TBC1D17Q9HA65 648 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
SNX29-202ENST00000563308 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 PCDHB12Q9Y5F1 795 aa11.49□□□□□ -0.57
SNX29-202ENST00000563308 CCDC196A0A1B0GTZ2 297 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 CFHP08603 1231 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 LINC00271P0C7V0 271 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 PDIA3P30101 505 aaKnown RBP11.48□□□□□ -0.57
SNX29-202ENST00000563308 IGBP1P78318 339 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 FGD1P98174 961 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 FBXO47Q5MNV8 452 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 ATAT1Q5SQI0 421 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 SYCE2Q6PIF2 218 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 VN1R2Q8NFZ6 395 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 TRAPPC12Q8WVT3 735 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 SDF4Q9BRK5 362 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 EPC1Q9H2F5 836 aa11.48□□□□□ -0.57
SNX29-202ENST00000563308 AGO3Q9H9G7 860 aaKnown RBP11.48□□□□□ -0.57
SNX29-202ENST00000563308 RC3H2Q9HBD1 1191 aaKnown RBP11.48□□□□□ -0.57
SNX29-202ENST00000563308 NCOA5Q9HCD5 579 aaKnown RBP11.48□□□□□ -0.57
SNX29-202ENST00000563308 AAASQ9NRG9 546 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms