RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NAA25Q14CX7 972 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 CROCCP2Q86T23 111 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 PDLIM2Q96JY6 352 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 TAAR1Q96RJ0 339 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 MAK16Q9BXY0 300 aaKnown RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 VWA5AO00534 786 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 HSF2BPO75031 334 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 SNHG28P0DPA3 235 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 PLS3P13797 630 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 CYP11B2P19099 503 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 RBL2Q08999 1139 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 PDCD2Q16342 344 aaPredicted RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 NLRP4Q96MN2 994 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 SPATC1LQ9H0A9 340 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 RNF14Q9UBS8 474 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 SAR1BQ9Y6B6 198 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 CIITAP33076 1130 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 RGS2P41220 211 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 SESN3P58005 492 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 HERVK_113P62684 666 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 HADHQ16836 314 aaKnown RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 PLEKHH3Q7Z736 793 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 ZFPM1Q8IX07 1006 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 OR6J1Q8NGC5 347 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 RMDN2Q96LZ7 410 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 ZMAT2Q96NC0 199 aaKnown RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 TACO1Q9BSH4 297 aaKnown RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 SLC38A10Q9HBR0 1119 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 KCNH4Q9UQ05 1017 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 MYL3P08590 195 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 ATP1A3P13637 1013 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 TBXAS1P24557 533 aaPredicted RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 IER5Q5VY09 327 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 CCDC117Q8IWD4 279 aaPredicted RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.17□□□□□ -1.1
TCF4-216ENST00000562680 KIAA1524Q8TCG1 905 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 KBTBD4Q9NVX7 518 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 ERAP1Q9NZ08 941 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 RGL1Q9NZL6 768 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 FAM237AA0A1B0GTK4 181 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 OPA1O60313 960 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 SRGAP2CP0DJJ0 459 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 GUCY2CP25092 1073 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 PLCB3Q01970 1234 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 IQCB1Q15051 598 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 ITIH6Q6UXX5 1313 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MYMKA6NI61 221 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 SLC16A4O15374 487 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MARK3P27448 753 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 KCNJ6P48051 423 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 OPTNQ96CV9 577 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 PCIF1Q9H4Z3 704 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 HAUS2Q9NVX0 235 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 NUB1Q9Y5A7 615 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 YDJCA8MPS7 323 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 CYTH3O43739 400 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 LPXNO60711 386 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 FCGRTP55899 365 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MFSD4BQ5TF39 518 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 C8orf74Q6P047 294 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MAATS1Q7Z4T9 603 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 METTL23Q86XA0 190 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 RUNDC3BQ96NL0 473 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 PXMP2Q9NR77 195 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 AGTPBP1Q9UPW5 1226 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 PCDHB4Q9Y5E5 795 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 P4HA2O15460 535 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 GJC1P36383 396 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 TFAMQ00059 246 aaKnown RBP8.16□□□□□ -1.1
TCF4-216ENST00000562680 PRKCEQ02156 737 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MYBPC2Q14324 1141 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 KRT39Q6A163 491 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 CYFIP1Q7L576 1253 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 GSTA5Q7RTV2 222 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 GPD1LQ8N335 351 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 C7orf31Q8N865 590 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 REEP2Q9BRK0 252 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MRPL47Q9HD33 250 aaKnown RBP8.16□□□□□ -1.1
TCF4-216ENST00000562680 IGSF9BQ9UPX0 1349 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 SLC37A4O43826 429 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 ATP2A2P16615 1042 aaKnown RBP8.16□□□□□ -1.1
TCF4-216ENST00000562680 HSPA6P17066 643 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 ZNF568Q3ZCX4 644 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 CCDC92Q53HC0 331 aaPredicted RBP8.16□□□□□ -1.1
TCF4-216ENST00000562680 C4orf19Q8IY42 314 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 MMS19Q96T76 1030 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 SYT17Q9BSW7 474 aa8.16□□□□□ -1.1
TCF4-216ENST00000562680 UNCXA6NJT0 531 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 GFPT2O94808 682 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 VAMP7P51809 220 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 KCNH2Q12809 1159 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 ZNF667Q5HYK9 610 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 USP49Q70CQ1 688 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 DHX40Q8IX18 779 aaKnown RBP8.15□□□□□ -1.1
TCF4-216ENST00000562680 CAPZA3Q96KX2 299 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 DBR1Q9UK59 544 aaKnown RBP8.15□□□□□ -1.1
TCF4-216ENST00000562680 GLTPD2A6NH11 291 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms