RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 PAPOLAP51003 745 aaKnown RBP13.52□□□□□ -0.25
SYNM-203ENST00000560674 COASYQ13057 564 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 XXYLT1Q8NBI6 393 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
SYNM-203ENST00000560674 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
SYNM-203ENST00000560674 H7C1W4 665 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 CALB1P05937 261 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 SUPT20HL1Q3ZLR7 823 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 YY1AP1Q9H869 796 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 KIAA1586Q9HCI6 787 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 BSDC1Q9NW68 430 aaPredicted RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 ASNSD1Q9NWL6 643 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 PCDHA6Q9UN73 950 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 PCDHA8Q9Y5H6 950 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 NCK2O43639 380 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 CHRNA3P32297 505 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 ARHGDIAP52565 204 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 SNAP25P60880 206 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 OR6B3Q8NGW1 331 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 TTLL11Q8NHH1 800 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 TAF1DQ9H5J8 278 aaPredicted RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 INPP5FQ9Y2H2 1132 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 TMEM259Q4ZIN3 620 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 EEPD1Q7L9B9 569 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 CEP70Q8NHQ1 597 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 ZNF564Q8TBZ8 553 aaPredicted RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 DYDC2Q96IM9 177 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 MRPL40Q9NQ50 206 aaKnown RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 OLA1Q9NTK5 396 aaKnown RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 F8W8V4 182 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 GCLMP48507 274 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 PRELPP51888 382 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 ARPP19P56211 112 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 CYB5R4Q7L1T6 521 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 DHX40Q8IX18 779 aaKnown RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 ATP6V1G3Q96LB4 118 aa13.51□□□□□ -0.25
SYNM-203ENST00000560674 KLHL8Q9P2G9 620 aaPredicted RBP13.51□□□□□ -0.25
SYNM-203ENST00000560674 RCAN1P53805 252 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 RWDD4Q6NW29 188 aaKnown RBP13.5□□□□□ -0.25
SYNM-203ENST00000560674 ARHGAP27Q6ZUM4 889 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
SYNM-203ENST00000560674 STRIP2Q9ULQ0 834 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 TRIM33Q9UPN9 1127 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 MRFAP1Q9Y605 127 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 ZBTB5O15062 677 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 CHGBP05060 677 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 COPS2P61201 443 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 NCLNQ969V3 563 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
SYNM-203ENST00000560674 NUP85Q9BW27 656 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 L3MBTL1Q9Y468 752 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 ESYT3A0FGR9 886 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 FAM187AA6NFU0 413 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 GOLGA8MH3BSY2 632 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 BRAFP15056 766 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 TEDDM1Q5T9Z0 273 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 RGS9BPQ6ZS82 235 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
SYNM-203ENST00000560674 TRPV6Q9H1D0 765 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 CYP26B1Q9NR63 512 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 SLC13A4Q9UKG4 626 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
SYNM-203ENST00000560674 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 METP08581 1390 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 ZNF394Q53GI3 561 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 ABCF3Q9NUQ8 709 aa13.5□□□□□ -0.25
SYNM-203ENST00000560674 H3BRJ5 948 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 KITP10721 976 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 OCA2Q04671 838 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 GRAPQ13588 217 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 DSTYKQ6XUX3 929 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 TRIM59Q8IWR1 403 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 VPS11Q9H270 941 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 E9PMD0 336 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms